RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 GOLGA7BQ2TAP0 167 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CCDC14Q49A88 953 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TTMPQ5BVD1 217 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TNFAIP8L3Q5GJ75 292 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 KIAA1161Q6NSJ0 714 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SCYL2Q6P3W7 929 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ACSM6Q6P461 480 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ZNF449Q6P9G9 518 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 IGFL3Q6UXB1 125 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 LRRC31Q6UY01 552 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SCARA5Q6ZMJ2 495 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 MACC1Q6ZN28 852 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 C3orf62Q6ZUJ4 267 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ERN2Q76MJ5 926 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 ARHGAP22Q7Z5H3 698 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TECPR1Q7Z6L1 1165 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 PHLDB2Q86SQ0 1253 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 NLRP14Q86W24 1093 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CCDC25Q86WR0 208 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 RFX6Q8HWS3 928 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 FAM217AQ8IXS0 508 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SIX6OS1Q8N1H7 587 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SCML4Q8N228 414 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ARHGAP18Q8N392 663 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 PLD5Q8N7P1 536 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 BCORP1Q8N888 145 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 MCUQ8NE86 351 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 OR52L2PQ8NGH6 319 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 UBA3Q8TBC4 463 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ACTL9Q8TC94 416 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 PYROXD1Q8WU10 500 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 DYDC1Q8WWB3 177 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 NCSTNQ92542 709 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TM9SF4Q92544 642 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 RAPGEF5Q92565 580 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 AKAP1Q92667 903 aaKnown RBP eCLIP3.06□□□□□ -1.92
SPG11-225ENST00000561391 ARHGEF2Q92974 986 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 SH3KBP1Q96B97 665 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SDCCAG3Q96C92 435 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 MTBPQ96DY7 904 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CHMP6Q96FZ7 201 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SMARCD1Q96GM5 515 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 FAR2Q96K12 515 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 OR6C1Q96RD1 312 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SMC6Q96SB8 1091 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CCT8L2Q96SF2 557 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CYTH2Q99418 400 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 VAT1Q99536 393 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SLX1AQ9BQ83 275 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 GPATCH1Q9BRR8 931 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 TUBB6Q9BUF5 446 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ELOVL1Q9BW60 279 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TMEM120AQ9BXJ8 343 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 UCK2Q9BZX2 261 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TRIM7Q9C029 511 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SUDS3Q9H7L9 328 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 ACTR5Q9H9F9 607 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 POPDC2Q9HBU9 364 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 XAB2Q9HCS7 855 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 SAYSD1Q9NPB0 183 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CNGB3Q9NQW8 809 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.06□□□□□ -1.92
SPG11-225ENST00000561391 LIN7CQ9NUP9 197 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 SPATS2LQ9NUQ6 558 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 ARL8BQ9NVJ2 186 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 HAUS2Q9NVX0 235 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.06□□□□□ -1.92
SPG11-225ENST00000561391 STMN3Q9NZ72 180 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 KIF17Q9P2E2 1029 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SEC14L3Q9UDX4 400 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 KCNN3Q9UGI6 736 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 RSPH14Q9UHP6 348 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SLC12A6Q9UHW9 1150 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 XPO7Q9UIA9 1087 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 MOSPD1Q9UJG1 213 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TINAGQ9UJW2 476 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 DNPEPQ9ULA0 475 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SLC12A4Q9UP95 1085 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 UBE2J1Q9Y385 318 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 IQANK1A0A1B0GTG1 560 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 NKX2-6A6NCS4 301 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM90A18PA6NE21 464 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM90A16PA6NEW6 464 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 AGAP5A6NIR3 686 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM90A9PA6NNJ1 464 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ERI2A8K979 691 aaKnown RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 FAM90A5PA8MXJ8 464 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 E5RJQ4 531 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 E7ESA3 106 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 POC1B-GALNT4F8VUJ3 575 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 H0Y3Z8 333 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 H7C0C1 242 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 TM9SF1O15321 606 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 PRPF4O43172 522 aaKnown RBP eCLIP3.05□□□□□ -1.92
SPG11-225ENST00000561391 ARHGEF9O43307 516 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ATP5HO75947 161 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 ACSL3O95573 720 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 IFNB1P01574 187 aa3.05□□□□□ -1.92
SPG11-225ENST00000561391 MBPP02686 304 aaPredicted RBP3.05□□□□□ -1.92
SPG11-225ENST00000561391 MT-ND3P03897 115 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms