RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ZNF354AO60765 605 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 P04436 131 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 GABRA1P14867 456 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 TNNI3P19429 210 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 IVDP26440 423 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 CERS1P27544 350 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ADH7P40394 386 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 PEX19P40855 299 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ELK3P41970 407 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 MAN2A2P49641 1150 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 TAS2R39P59534 338 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 TGM3Q08188 693 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 STX4Q12846 297 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 MPEG1Q2M385 716 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 C1orf185Q5T7R7 199 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 WLSQ5T9L3 541 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 STEAP4Q687X5 459 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ARSKQ6UWY0 536 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 FAM47EQ6ZV65 393 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 FRA10AC1Q70Z53 315 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 VN1R5Q7Z5H4 357 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ZC3HC1Q86WB0 502 aaKnown RBP10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 LIX1LQ8IVB5 337 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 CFAP36Q96G28 342 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 OR8D2Q9GZM6 311 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ROGDIQ9GZN7 287 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ANKZF1Q9H8Y5 726 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 COPS7BQ9H9Q2 264 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 LYRM4Q9HD34 91 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 PRDM7Q9NQW5 492 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 TUBA8Q9NY65 449 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 CTNNAL1Q9UBT7 734 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ACAD8Q9UKU7 415 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 ATG4BQ9Y4P1 393 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 PCDHGB3Q9Y5G1 929 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 TEX264Q9Y6I9 313 aa10.94□□□□□ -0.66
CARMIL3-204ENST00000561354 PRRC2AP48634 2157 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 FAM95CA0A1B0GW59 222 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ATP6AP2A0A1C7CYW4 349 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 C17orf105B2RV13 164 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ATP6AP2O75787 350 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 CELA3AP09093 270 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 HOXB4P17483 251 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 GGT5P36269 586 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 KCNC1P48547 511 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 DNASE1L1P49184 302 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 MGAT5Q09328 741 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 TBL3Q12788 808 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 MORF4L2Q15014 288 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 TGFBIQ15582 683 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 TSNQ15631 228 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 C18orf21Q32NC0 220 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 HP1BP3Q5SSJ5 553 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 RIPPLY2Q5TAB7 128 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 TCAIMQ8N3R3 496 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF321PQ8N8H1 164 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 SRFBP1Q8NEF9 429 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 SPATA4Q8NEY3 305 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 NUBPLQ8TB37 319 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 SLC2A12Q8TD20 617 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF721Q8TF20 911 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ANKRD49Q8WVL7 239 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 WDR34Q96EX3 536 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 CAPZA3Q96KX2 299 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 WDR83Q9BRX9 315 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 POLDIP3Q9BY77 421 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 LDAHQ9H6V9 325 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 POPDC3Q9HBV1 291 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 SH2D2AQ9NP31 389 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 CCM2LQ9NUG4 571 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF358Q9NW07 568 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ST6GALNAC2Q9UJ37 374 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF490Q9ULM2 529 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 EDARQ9UNE0 448 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 CHMP2BQ9UQN3 213 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 PSAT1Q9Y617 370 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 EML6Q6ZMW3 1958 aa10.93□□□□□ -0.66
CARMIL3-204ENST00000561354 TRGV5A0A0B4J1U4 118 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 MYOCOSA0A1B0GUC4 107 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 SYT5O00445 386 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 CLGNO14967 610 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 TAPBPO15533 448 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 PRAMEF4O60810 478 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 LDB3O75112 727 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 ETHE1O95571 254 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 CCL3P10147 92 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 KLK2P20151 261 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 ENDOUP21128 410 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 KIR2DL3P43628 341 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 PPP2R2AP63151 447 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 ILF2Q12905 390 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF460Q14592 562 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 ZNF791Q3KP31 576 aaPredicted RBP10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 PIGGQ5H8A4 983 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 CDKL4Q5MAI5 379 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 PRAMEF9Q5VWM5 478 aa10.92□□□□□ -0.66
CARMIL3-204ENST00000561354 SLC22A10Q63ZE4 541 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms