RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 BST1Q10588 318 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 SRSF6Q13247 344 aaKnown RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 KCNAB2Q13303 367 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 ELAVL1Q15717 326 aaKnown RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 TCHHL1Q5QJ38 904 aaPredicted RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 ATP1A1-AS1Q5TC04 95 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 KANK2Q63ZY3 851 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 NOXRED1Q6NXP6 359 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 IKBIPQ70UQ0 350 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 SLC29A4Q7RTT9 530 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 VN1R5Q7Z5H4 357 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 ANKRD37Q7Z713 158 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 APLFQ8IW19 511 aaPredicted RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 OR14A16Q8NHC5 309 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 M1APQ8TC57 530 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 RIT1Q92963 219 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 C8orf44Q96CB5 159 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 PPP1R36Q96LQ0 422 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 MAGEB18Q96M61 343 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 RILPQ96NA2 401 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 SH3GL2Q99962 352 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 SORBS1Q9BX66 1292 aaKnown RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 EBPLQ9BY08 206 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.07□□□□□ -0.8
TPM1-229ENST00000561242 ZNF700Q9H0M5 742 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 ADAP2Q9NPF8 381 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 SH3BP4Q9P0V3 963 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 MAP10Q9P2G4 905 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 ZDHHC2Q9UIJ5 367 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 UTS2RQ9UKP6 389 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 CFL2Q9Y281 166 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 DLGAP4Q9Y2H0 992 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 POLR3HQ9Y535 204 aaPredicted RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 PCDHGB7Q9Y5F8 929 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 KCNMB2Q9Y691 235 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 A0A0A6YYD5 115 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 GLOD5A6NK44 160 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 CAPN14A8MX76 684 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 UBFD1O14562 309 aaKnown RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 HDAC3O15379 428 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 DIAPH2O60879 1101 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 LDB3O75112 727 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 EEDO75530 441 aaKnown RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 LYPLA1O75608 230 aaPredicted RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 ZFAND5O76080 213 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 SCELO95171 688 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 MED26O95402 600 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 SERPINA7P05543 415 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 UMODP07911 640 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 DHRS4L1P0CG22 281 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 KRT20P35900 424 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 ARG2P78540 354 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 BTG2P78543 158 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 OC90Q02509 493 aaPredicted RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 IL10RAQ13651 578 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 LACTB2Q53H82 288 aaPredicted RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 TTMPQ5BVD1 217 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 ADNP2Q6IQ32 1131 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 KIRREL2Q6UWL6 708 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 SPATA19Q7Z5L4 167 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 DTWD1Q8N5C7 304 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 ZNF781Q8N8C0 355 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 LSM14AQ8ND56 463 aaKnown RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 MORN4Q8NDC4 146 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 OR11G2Q8NGC1 345 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 PIWIL2Q8TC59 973 aaKnown RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 C16orf78Q8WTQ4 265 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 TMEM125Q96AQ2 219 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 PPCDCQ96CD2 204 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 WBP1Q96G27 269 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 APIPQ96GX9 242 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 CNPPD1Q9BV87 410 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 BRINP2Q9C0B6 783 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 OR8D2Q9GZM6 311 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 NSRP1Q9H0G5 558 aaKnown RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 STMN3Q9NZ72 180 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 MARCOQ9UEW3 520 aaPredicted RBP10.06□□□□□ -0.8
TPM1-229ENST00000561242 BCAP29Q9UHQ4 241 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 TUBD1Q9UJT1 453 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 TRIM33Q9UPN9 1127 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 ATG4BQ9Y4P1 393 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 PCDHA9Q9Y5H5 950 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 DNAJC15Q9Y5T4 150 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 HS3ST3B1Q9Y662 390 aa10.06□□□□□ -0.8
TPM1-229ENST00000561242 ZNF292O60281 2723 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 IGHV1-45A0A0A0MS14 117 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ATP6AP2A0A1C7CYW4 349 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 C17orf105B2RV13 164 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 TERTO14746 1132 aaKnown RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 KLF11O14901 512 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 POLR3GO15318 223 aaPredicted RBP10.05□□□□□ -0.8
TPM1-229ENST00000561242 CFLARO15519 480 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 ATP6AP2O75787 350 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 AIFM1O95831 613 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 SLC35E2P0CK97 266 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 HTR6P50406 440 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 FOXA1P55317 472 aa10.05□□□□□ -0.8
TPM1-229ENST00000561242 NRG3P56975 720 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms