RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MVDP53602 400 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 CDH4P55283 916 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 CTBP2P56545 445 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 MGAT3Q09327 533 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 GGTA1PQ4G0N0 100 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 ZNF385BQ569K4 471 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 XKR6Q5GH73 641 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 TYW3Q6IPR3 259 aaKnown RBP15.74■□□□□ 0.11
TPM1-228ENST00000560975 CCSAPQ6IQ19 270 aaPredicted RBP15.74■□□□□ 0.11
TPM1-228ENST00000560975 CEACAM20Q6UY09 585 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 ZNF730Q6ZMV8 503 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 LAPTM4BQ86VI4 370 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 OR6C4Q8NGE1 309 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 GATAD2BQ8WXI9 593 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 THSD1Q9NS62 852 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 DNAJC11Q9NVH1 559 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 ZNF222Q9UK12 451 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 RABL2BQ9UNT1 228 aa15.74■□□□□ 0.11
TPM1-228ENST00000560975 RUVBL1Q9Y265 456 aaKnown RBP15.74■□□□□ 0.11
TPM1-228ENST00000560975 RPL36Q9Y3U8 105 aaKnown RBP15.74■□□□□ 0.11
TPM1-228ENST00000560975 GLYATL1P3A0A0U1RQE8 302 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 TLX2O43763 284 aaPredicted RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 OR10H3O60404 316 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 PRMT3O60678 531 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 C6orf47O95873 294 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 CD160O95971 181 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 PPIBP23284 216 aaKnown RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 LIMS1P48059 325 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 AGFG1P52594 562 aaKnown RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 CDK6Q00534 326 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 MEDAGQ5VYS4 303 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 TEX261Q6UWH6 196 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 ANKS3Q6ZW76 656 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 VRK3Q8IV63 474 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 TM9SF4Q92544 642 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 P2RY13Q9BPV8 354 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 MARVELD1Q9BSK0 173 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 PPP1R3EQ9H7J1 279 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 FZD3Q9NPG1 666 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 ENOPH1Q9UHY7 261 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 ENPP4Q9Y6X5 453 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 U3KQ87 197 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 HEPACAM2A8MVW5 462 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 BPIP17213 487 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 TYMPP19971 482 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 IDSP22304 550 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 STK19P49842 368 aaPredicted RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 LRRC74AQ0VAA2 488 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 METTL2BQ6P1Q9 378 aaKnown RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 ASB18Q6ZVZ8 466 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 ZNF280BQ86YH2 543 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 GALNT11Q8NCW6 608 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 AP3S1Q92572 193 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 ARHGAP39Q9C0H5 1083 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 KCTD5Q9NXV2 234 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 MBD1Q9UIS9 605 aaPredicted RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 PCDHB8Q9UN66 801 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 SLC43A1O75387 559 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 XKP51811 444 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 SEC23BQ15437 767 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 SNAPC1Q16533 368 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 TMEM65Q6PI78 240 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 KIAA1143Q96AT1 154 aaPredicted RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 MYO19Q96H55 970 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 ZC3HAV1LQ96H79 300 aaKnown RBP15.73■□□□□ 0.11
TPM1-228ENST00000560975 HDHD2Q9H0R4 259 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 TMEM161AQ9NX61 479 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 BTNL2Q9UIR0 455 aa15.73■□□□□ 0.11
TPM1-228ENST00000560975 LINC00862A6NCI5 91 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 K7ERQ8 282 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 IRF1P10914 325 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 OSMP13725 252 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 JUPP14923 745 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 SNRPGP62308 76 aaKnown RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 RGS1Q08116 209 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 HEPACAMQ14CZ8 416 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 MACC1Q6ZN28 852 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 PLEKHM3Q6ZWE6 761 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 C16orf62Q7Z3J2 963 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 COMMD7Q86VX2 200 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 OR52I1Q8NGK6 324 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 CIDECQ96AQ7 238 aaPredicted RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 MAGEB10Q96LZ2 347 aaPredicted RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 TMEM43Q9BTV4 400 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 DPCDQ9BVM2 203 aaPredicted RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 SLC28A3Q9HAS3 691 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 REV1Q9UBZ9 1251 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 ZNF282Q9UDV7 671 aaPredicted RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 ELF5Q9UKW6 265 aaPredicted RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 PADI3Q9ULW8 664 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 FFAR1O14842 300 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 AKAP8O43823 692 aaKnown RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 IFNW1P05000 195 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 SOAT1P35610 550 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 CHI3L1P36222 383 aaPredicted RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 LIM2P55344 173 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 PPP3R1P63098 170 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 RAE1P78406 368 aaKnown RBP15.72■□□□□ 0.11
TPM1-228ENST00000560975 RING1Q06587 406 aa15.72■□□□□ 0.11
TPM1-228ENST00000560975 KLHL22Q53GT1 634 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms