RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MAN1A2O60476 641 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 PRAMEF2O60811 474 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 PRKRAO75569 313 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 AGFG2O95081 481 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 SCELO95171 688 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 MLYCDO95822 493 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 PDYNP01213 254 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 IMPDH1P20839 514 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 HMOX2P30519 316 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 BSGP35613 385 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 CD96P40200 585 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 ARFIP1P53367 373 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 HNRNPH2P55795 449 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TNFRSF17Q02223 184 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TUBA3CQ13748 450 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 RASA2Q15283 850 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TERF2Q15554 542 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR1C1Q15619 314 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 CCDC153Q494R4 210 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 GGTA1PQ4G0N0 100 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 UNC50Q53HI1 259 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZNF766Q5HY98 468 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 C10orf62Q5T681 223 aaPredicted RBP12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 C18orf63Q68DL7 685 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TUBA3EQ6PEY2 450 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 GPRIN3Q6ZVF9 776 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 PAGE2Q7Z2X7 111 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TDRPQ86YL5 185 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 C4orf33Q8N1A6 199 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZCCHC7Q8N3Z6 543 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 BCORP1Q8N888 145 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 NFAM1Q8NET5 270 aaPredicted RBP12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 FAR1Q8WVX9 515 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TANKQ92844 425 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 RBM18Q96H35 190 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 C5orf34Q96MH7 638 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 DGAT2Q96PD7 388 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 HBEGFQ99075 208 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 NPAS2Q99743 824 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 C1QTNF3Q9BXJ4 246 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 DDX31Q9H8H2 851 aaKnown RBP12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 OLAHQ9NV23 265 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 NMRK1Q9NWW6 199 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 PSD3Q9NYI0 1048 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 LRFN1Q9P244 771 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 VTI1BQ9UEU0 232 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TRPS1Q9UHF7 1281 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 STK38LQ9Y2H1 464 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 ATG4BQ9Y4P1 393 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 TMPRSS11DO60235 418 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 FGF17O60258 216 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR10H2O60403 315 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 KRT6AP02538 564 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 KRT6BP04259 564 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 KLK1P06870 262 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 NR2F6P10588 404 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 CD46P15529 392 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 KRT6CP48668 564 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 CYB561P49447 251 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 PRKAA2P54646 552 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 FOLH1Q04609 750 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 ERCC6LQ2NKX8 1250 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 CCNYL2Q5T2Q4 361 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 FHL5Q5TD97 284 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 SPINK14Q6IE38 97 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 RPUSD3Q6P087 351 aaKnown RBP12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 EMBQ6PCB8 327 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 LGI4Q8N135 537 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 FAM26EQ8N5C1 309 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 TMEM156Q8N614 296 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 APCDD1LQ8NCL9 501 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 C7orf57Q8NEG2 295 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR14A16Q8NHC5 309 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 TMEM125Q96AQ2 219 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 ANKRD9Q96BM1 317 aaPredicted RBP12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 PPWD1Q96BP3 646 aaKnown RBP12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 SIGLEC12Q96PQ1 595 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 COPS7AQ9UBW8 275 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 MYO18BQ8IUG5 2567 aa12.1□□□□□ -0.47
CTDSPL2-209ENST00000560620 SHANK1Q9Y566 2161 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 A0A0A6YYD5 115 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 CCDC151A5D8V7 595 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 PROM1O43490 865 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 ULK1O75385 1050 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 CRCPO75575 148 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 ITGA10O75578 1167 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZFAND5O76080 213 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 SEMA3DO95025 777 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 PROCP04070 461 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 CPA3P15088 417 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 MAPK12P53778 367 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 MLF1P58340 268 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 PLIN5Q00G26 463 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 LCP2Q13094 533 aa12.09□□□□□ -0.47
CTDSPL2-209ENST00000560620 UBAP2LQ14157 1087 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms