RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 MBNL1Q9NR56 388 aaKnown RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ACER3Q9NUN7 267 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 TBCCD1Q9NVR7 557 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 PSORS1C1Q9UIG5 152 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ACSL6Q9UKU0 697 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 RNF6Q9Y252 685 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 HCN4Q9Y3Q4 1203 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 PRKAB1Q9Y478 270 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CHD9Q3L8U1 2897 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 PRAMEF33A0A0G2JMD5 474 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 A0A1W2PP55 124 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 OR2A25A4D2G3 310 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SH3D21A4FU49 640 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PRAMEF25A6NGN4 478 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CLDN24A6NM45 220 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 GRXCR1A8MXD5 290 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 H7BY64 318 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 OR1F1O43749 312 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PRICKLE3O43900 615 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PCDHGA12O60330 932 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PRAMEF10O60809 474 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 BCAS1O75363 584 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 INMTO95050 263 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 MFN2O95140 757 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 ADAP00813 363 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 DNTTP04053 509 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CEACAM5P06731 702 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 TFPTP0C1Z6 253 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 ACP5P13686 325 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF12P17014 697 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF182P17025 639 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 GABRB1P18505 474 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PSMB5P28074 263 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 NDUFS1P28331 727 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CMPK1P30085 196 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CD6P30203 668 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 NTSP30990 170 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 GDI1P31150 447 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 IGFALSP35858 605 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SSR2P43308 183 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 KIR2DL1P43626 348 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 STT3AP46977 705 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 KHKP50053 298 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CDH12P55289 794 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 C21orf59P57076 290 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CYP4F2P78329 520 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PIGFQ07326 219 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SFSWAPQ12872 951 aaKnown RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 BNIP3Q12983 259 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 FGL2Q14314 439 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 GNA13Q14344 377 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CLCA4Q14CN2 919 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 MLF2Q15773 248 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 UAP1L1Q3KQV9 507 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SPDYE7PQ495Y7 208 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 FBXO43Q4G163 708 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 MRM1Q6IN84 353 aaKnown RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 BHLHB9Q6PI77 547 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SYCE2Q6PIF2 218 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CEACAM20Q6UY09 585 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 WASH2PQ6VEQ5 465 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 Q6ZNX1 250 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 C6orf120Q7Z4R8 191 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 UBE3DQ7Z6J8 389 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 P2RY8Q86VZ1 359 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CCDC71Q8IV32 467 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 DNAJC22Q8N4W6 341 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 OR5AK3PQ8NH89 298 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 B4GALNT2Q8NHY0 566 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 APH1BQ8WW43 257 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 S100ZQ8WXG8 99 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 NR4A3Q92570 626 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PROX1Q92786 737 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SLC35G5Q96KT7 338 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PRAP1Q96NZ9 151 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 TEFMQ96QE5 360 aaKnown RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 MYADMQ96S97 322 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 GABRG3Q99928 467 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 APOOQ9BUR5 198 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SPATA5L1Q9BVQ7 753 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 TRMT61BQ9BVS5 477 aaKnown RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SORBS1Q9BX66 1292 aaKnown RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 DGCR6LQ9BY27 220 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SLC17A9Q9BYT1 436 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 PLA2G2FQ9BZM2 168 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 KIR3DX1Q9H7L2 352 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 MRPS30Q9NP92 439 aaKnown RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SLAMF7Q9NQ25 335 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 TM7SF3Q9NS93 570 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 CHD7Q9P2D1 2997 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 P2RX2Q9UBL9 471 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 FTSJ1Q9UET6 329 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 NDOR1Q9UHB4 597 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 RAB23Q9ULC3 237 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 SNX7Q9UNH6 387 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 MGAT4BQ9UQ53 548 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 YBX2Q9Y2T7 364 aaKnown RBP7.68□□□□□ -1.18
SMAD3-212ENST00000559937 FANCMQ8IYD8 2048 aa7.68□□□□□ -1.18
SMAD3-212ENST00000559937 LRIT2A6NDA9 550 aa7.67□□□□□ -1.18
SMAD3-212ENST00000559937 EFCAB10A6NFE3 127 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms