RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SRSF1Q07955 248 aaKnown RBP eCLIP11.22□□□□□ -0.61
TPM1-216ENST00000558910 TUBA3CQ13748 450 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 MEP1AQ16819 746 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 ADPRMQ3LIE5 342 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 ZNF766Q5HY98 468 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 DEPDC1Q5TB30 811 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 ZNF468Q5VIY5 522 aaPredicted RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 LIPJQ5W064 366 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 C18orf63Q68DL7 685 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 TUBA3EQ6PEY2 450 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 RPS19BP1Q86WX3 136 aaKnown RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 SLC5A8Q8N695 610 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 ZNF321PQ8N8H1 164 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 CCDC63Q8NA47 563 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 OR4F6Q8NGB9 312 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 OR2W6PQ8NHA6 318 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 EPS8L3Q8TE67 593 aaKnown RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 UCN3Q969E3 161 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 ISL2Q96A47 359 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 PPWD1Q96BP3 646 aaKnown RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 UTP23Q9BRU9 249 aaKnown RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 CENPKQ9BS16 269 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 TBCDQ9BTW9 1192 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 NPLQ9BXD5 320 aaPredicted RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 OR8D2Q9GZM6 311 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 EPB41L4BQ9H329 900 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 ZBTB26Q9HCK0 441 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 MMP25Q9NPA2 562 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 FARSBQ9NSD9 589 aaKnown RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 COPG2Q9UBF2 871 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 SH3BGRL2Q9UJC5 107 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 OSGIN2Q9Y236 505 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 PCDHGA11Q9Y5H2 935 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 SPACA6W5XKT8 324 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 SHANK1Q9Y566 2161 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 A0A1W2PQ72 361 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 BLACEA4D250 179 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 CYR61O00622 381 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 PLPP1O14494 284 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 ZNHIT1O43257 154 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 PRKNO60260 465 aaPredicted RBP11.21□□□□□ -0.61
TPM1-216ENST00000558910 OR4F21O95013 312 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 SBK3P0C264 359 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 GSTM2P28161 218 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 TPP2P29144 1249 aaPredicted RBP11.21□□□□□ -0.61
TPM1-216ENST00000558910 TSFMP43897 325 aaKnown RBP11.21□□□□□ -0.61
TPM1-216ENST00000558910 HNRNPH2P55795 449 aaKnown RBP11.21□□□□□ -0.61
TPM1-216ENST00000558910 KCNK10P57789 538 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 IFT88Q13099 833 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 OR1C1Q15619 314 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 MAPKAPK3Q16644 382 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 TMEM35AQ53FP2 167 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 TCHHL1Q5QJ38 904 aaPredicted RBP11.21□□□□□ -0.61
TPM1-216ENST00000558910 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 CYP20A1Q6UW02 462 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 SCIMPQ6UWF3 145 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 SCUBE1Q8IWY4 988 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 FAM26EQ8N5C1 309 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 CCNYL1Q8N7R7 359 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 SRFBP1Q8NEF9 429 aaKnown RBP11.21□□□□□ -0.61
TPM1-216ENST00000558910 HAS2Q92819 552 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 REPS1Q96D71 796 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 TAAR6Q96RI8 345 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 TXLNGYQ9BZA5 131 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 ROGDIQ9GZN7 287 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 ELOVL6Q9H5J4 265 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 OLAHQ9NV23 265 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 ATG4BQ9Y4P1 393 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 MMACHCQ9Y4U1 282 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 CLCA3PQ9Y6N3 262 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 LRRK2Q5S007 2527 aa11.21□□□□□ -0.61
TPM1-216ENST00000558910 DOPEY2Q9Y3R5 2298 aa11.21□□□□□ -0.62
TPM1-216ENST00000558910 ESPL1Q14674 2120 aa11.21□□□□□ -0.62
TPM1-216ENST00000558910 IGKV3D-11A0A0A0MRZ8 115 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 C17orf105B2RV13 164 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 WWP2O00308 870 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 FGF17O60258 216 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 DLX3O60479 287 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 PRAMEF2O60811 474 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 WISP2O76076 250 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 RASAL1O95294 804 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 RNF224P0DH78 156 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 COL6A2P12110 1019 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 PTX3P26022 381 aaPredicted RBP11.2□□□□□ -0.62
TPM1-216ENST00000558910 RFC3P40938 356 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 CLCN2P51788 898 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 HSD17B7P56937 341 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 VSNL1P62760 191 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 TRAF3Q13114 568 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 RCN2Q14257 317 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 GPR180Q86V85 440 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 ZNF595Q8IYB9 648 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 C4orf33Q8N1A6 199 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 BCORP1Q8N888 145 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 CDYL2Q8N8U2 506 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 NFAM1Q8NET5 270 aaPredicted RBP11.2□□□□□ -0.62
TPM1-216ENST00000558910 B3GNT7Q8NFL0 401 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 ELP5Q8TE02 316 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms