RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 NCBP2P52298 156 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 RRAS2P62070 204 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 OPCMLQ14982 345 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 ZNF419Q96HQ0 510 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 PCDHA2Q9Y5H9 948 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 ARL5CA6NH57 179 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 ZNF821O75541 412 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 CH25HO95992 272 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 DRD5P21918 477 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 DCTP40126 519 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 TAS2R31P59538 309 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 PXDC1Q5TGL8 231 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 NRARPQ7Z6K4 114 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 C1orf127Q8N9H9 656 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR56A1Q8NGH5 318 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 YARS2Q9Y2Z4 477 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 AP1M2Q9Y6Q5 423 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 NME4O00746 187 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 WNT4P56705 351 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 ERVFC1P60507 584 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 TECRLQ5HYJ1 363 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 DPY19L2P1Q6NXN4 242 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 C1orf52Q8N6N3 182 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 ZNF454Q8N9F8 522 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 NT5C3BQ969T7 300 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 NTPCRQ9BSD7 190 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 NMUR1Q9HB89 426 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 EMC7Q9NPA0 242 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 MEPEQ9NQ76 525 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 EEF1E1-BLOC1S5C9J1V9 151 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 AIPO00170 330 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR7A17O14581 309 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 CSF1P09603 554 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 WEE1P30291 646 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 MAGEA11P43364 429 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 SOX9P48436 509 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 VEGFCP49767 419 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 AFF3P51826 1226 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 PAFAH1B3Q15102 231 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 UGCGQ16739 394 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 PTCHD3Q3KNS1 767 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLX4IPQ5VYV7 408 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 PLAG1Q6DJT9 500 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 KCTD20Q7Z5Y7 419 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 ELP5Q8TE02 316 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 CLIP3Q96DZ5 547 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 CDKN2AIPNLQ96HQ2 116 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 YIPF4Q9BSR8 244 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 LRFN1Q9P244 771 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 TNS2Q63HR2 1409 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
CSPG4P12-201ENST00000558282 IQCF5A8MTL0 148 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 WASH3PC4AMC7 463 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 ADAMTS3O15072 1205 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 TO15178 435 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 CSTBP04080 98 aaKnown RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 SNHG28P0DPA3 235 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 CMPK1P30085 196 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 ETV4P43268 484 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 PAN3Q58A45 887 aaKnown RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 ALG1LQ6GMV1 187 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 PLEKHH3Q7Z736 793 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 PHYKPLQ8IUZ5 450 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 BBS10Q8TAM1 723 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 SIAEQ9HAT2 523 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 SMCO4Q9NRQ5 59 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 TXNL4BQ9NX01 149 aaKnown RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 WDR45Q9Y484 360 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 hCG_1807616A0A1W2PRN6 198 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 CD8B2A6NJW9 211 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 ERCC1P07992 297 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 CD8BP10966 210 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 DDCP20711 480 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 RPS10P46783 165 aaKnown RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 RCAN2Q14206 197 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 ELOAQ14241 798 aaKnown RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 ABRAXAS2Q15018 415 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 TAF1CQ15572 869 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 BAK1Q16611 211 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 CGB2Q6NT52 195 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 SLC22A25Q6T423 547 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 ZC3H3Q8IXZ2 948 aaKnown RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR56B4Q8NH76 319 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 PMM1Q92871 262 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 KIAA1143Q96AT1 154 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 FKBP10Q96AY3 582 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 BTF3L4Q96K17 158 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 LRR1Q96L50 414 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 HIST1H2AAQ96QV6 131 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 LOC105369274A0A096LPK9 316 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 OR6C6A6NF89 314 aa11.31□□□□□ -0.6
CSPG4P12-201ENST00000558282 CLDN4O14493 209 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms