RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 WFDC6Q9BQY6 131 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 TIMM29Q9BSF4 260 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 PCBD2Q9H0N5 130 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 SERHL2Q9H4I8 314 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 EPS8L2Q9H6S3 715 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 SIRT3Q9NTG7 399 aaPredicted RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 PADI2Q9Y2J8 665 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 SCN3AQ9NY46 2000 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 C5orf58C9J3I9 102 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 PGRMC2O15173 223 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 UGT2B11O75310 529 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 JRKO75564 520 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 SEMA3DO95025 777 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 RASGRP1O95267 797 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 ARAFP10398 606 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 CERS1P27544 350 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 DCKP27707 260 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 DUSP2Q05923 314 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 FADDQ13158 208 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 DGCR6Q14129 220 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 AGERQ15109 404 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 C18orf63Q68DL7 685 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 TMEM92Q6UXU6 159 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 RBM45Q8IUH3 476 aaKnown RBP10.02□□□□□ -0.8
TPM1-210ENST00000558264 SHISA5Q8N114 240 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 LGI4Q8N135 537 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 OR2L3Q8NG85 312 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 RPLP0P6Q8NHW5 317 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 GIPC3Q8TF64 312 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 LZICQ8WZA0 190 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 MRGPRX1Q96LB2 322 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 ZNF300Q96RE9 604 aaPredicted RBP10.02□□□□□ -0.8
TPM1-210ENST00000558264 GABRG3Q99928 467 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 TMEM168Q9H0V1 697 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 TMEM38AQ9H6F2 299 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 TRPC4Q9UBN4 977 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 SLC6A14Q9UN76 642 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 ANGPT4Q9Y264 503 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 PCDHGB3Q9Y5G1 929 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 SNX5Q9Y5X3 404 aa10.02□□□□□ -0.8
TPM1-210ENST00000558264 hCG_2014768A0A024R1R8 64 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 H3BQ06 376 aaPredicted RBP10.02□□□□□ -0.81
TPM1-210ENST00000558264 PCDHGA12O60330 932 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 FADS2O95864 444 aaKnown RBP10.02□□□□□ -0.81
TPM1-210ENST00000558264 RECKO95980 971 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 OR12D1P0DN82 309 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 ACADMP11310 421 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 ALDH4A1P30038 563 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 RYKP34925 604 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 KRT20P35900 424 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 FEN1P39748 380 aaKnown RBP10.02□□□□□ -0.81
TPM1-210ENST00000558264 ACTR1BP42025 376 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 IDH2P48735 452 aaKnown RBP10.02□□□□□ -0.81
TPM1-210ENST00000558264 ACTR1AP61163 376 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 HYAL2Q12891 473 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 SLAMF1Q13291 335 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 HTR4Q13639 388 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 GPR19Q15760 415 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 SYPL1Q16563 259 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 ZNF630Q2M218 657 aaPredicted RBP10.02□□□□□ -0.81
TPM1-210ENST00000558264 ZNF542PQ5EBM4 170 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 TOR1AIP1Q5JTV8 583 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 FAHD1Q6P587 224 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 OR2L8Q8NGY9 312 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 PATE1Q8WXA2 126 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 OR2M4Q96R27 311 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 CSF3RQ99062 836 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 EPYCQ99645 322 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 SH3GL3Q99963 347 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 GLIPR2Q9H4G4 154 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 KCNK12Q9HB15 430 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 BLOC1S6Q9UL45 172 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 TSC22D4Q9Y3Q8 395 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 ATG4BQ9Y4P1 393 aa10.02□□□□□ -0.81
TPM1-210ENST00000558264 A0A0A6YYD5 115 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 FAM20BO75063 409 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 NDUFV2P19404 249 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 CCT3P49368 545 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 NCBP2P52298 156 aaKnown RBP eCLIP10.01□□□□□ -0.81
TPM1-210ENST00000558264 NUDT6P53370 316 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 PCBP3P57721 371 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 PCBP4P57723 403 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 EMX1Q04741 257 aaPredicted RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 BNIP3Q12983 259 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 RAB30Q15771 203 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 ZC3H12BQ5HYM0 836 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 TMEM236Q5W0B7 351 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 SAXO2Q658L1 398 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 AHSA2Q719I0 299 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 WDR53Q7Z5U6 358 aaPredicted RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 KCT2Q8NC54 265 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 ZNF540Q8NDQ6 660 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 UTP15Q8TED0 518 aaKnown RBP10.01□□□□□ -0.81
TPM1-210ENST00000558264 DOK4Q8TEW6 326 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 XAGE5Q8WWM1 108 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 LCN9Q8WX39 176 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 OR5P2Q8WZ92 322 aa10.01□□□□□ -0.81
TPM1-210ENST00000558264 TBC1D20Q96BZ9 403 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms