RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 OR4F6Q8NGB9 312 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 TRPC4APQ8TEL6 797 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 ATP6V1E2Q96A05 226 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 ARL8AQ96BM9 186 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 RBCK1Q9BYM8 510 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 TRIM8Q9BZR9 551 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 AICDAQ9GZX7 198 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 ZNF446Q9NWS9 450 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 TRPS1Q9UHF7 1281 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 ZNF225Q9UK10 706 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 RNF11Q9Y3C5 154 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 SLC22A7Q9Y694 548 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 TACC2O95359 2948 aa15.59■□□□□ 0.09
NEK9-211ENST00000557673 CCDC168Q8NDH2 2452 aa15.58■□□□□ 0.09
NEK9-211ENST00000557673 ADGRG4Q8IZF6 3080 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 OR2W5A6NFC9 320 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 ANKDD1BA6NHY2 528 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 C4orf51C9J302 202 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 H0YIV9 168 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 DHRS4L1P0CG22 281 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 ALDH3A1P30838 453 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 NAA20P61599 178 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 MPP2Q14168 576 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 HIST2H2ACQ16777 129 aaPredicted RBP15.58■□□□□ 0.08
NEK9-211ENST00000557673 ADPRMQ3LIE5 342 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 DEFB134Q4QY38 66 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 TTMPQ5BVD1 217 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 PLAG1Q6DJT9 500 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 HIST2H2AA3Q6FI13 130 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 GPRIN3Q6ZVF9 776 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 CPEB2Q7Z5Q1 589 aaKnown RBP15.58■□□□□ 0.08
NEK9-211ENST00000557673 AFAP1L2Q8N4X5 818 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 HORMAD2Q8N7B1 307 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 OR5T3Q8NGG3 340 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 ZNF473Q8WTR7 871 aaKnown RBP15.58■□□□□ 0.08
NEK9-211ENST00000557673 DMRT3Q9NQL9 472 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 TSC22D4Q9Y3Q8 395 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 PCDHGA11Q9Y5H2 935 aa15.58■□□□□ 0.08
NEK9-211ENST00000557673 CSMD2Q7Z408 3487 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 IGHV3-20A0A0C4DH32 117 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 TMEM120BA0PK00 339 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 GALR3O60755 368 aaPredicted RBP15.57■□□□□ 0.08
NEK9-211ENST00000557673 TRIM13O60858 407 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 DNAJB6O75190 326 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 CLDN14O95500 239 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 BPGMP07738 259 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 ZNF888P0CJ79 500 aaPredicted RBP15.57■□□□□ 0.08
NEK9-211ENST00000557673 PCNAP12004 261 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 HNRNPH1P31943 449 aaKnown RBP15.57■□□□□ 0.08
NEK9-211ENST00000557673 SERPINB4P48594 390 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 OLR1P78380 273 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 ASPHQ12797 758 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 HERC3Q15034 1050 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 EXT1Q16394 746 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 C3AR1Q16581 482 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 CPSF6Q16630 551 aaKnown RBP eCLIP15.57■□□□□ 0.08
NEK9-211ENST00000557673 BTBD16Q32M84 506 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 TOR1AIP1Q5JTV8 583 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 CFAP157Q5JU67 520 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 ACER2Q5QJU3 275 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 SPPL2CQ8IUH8 684 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 WDR20Q8TBZ3 569 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 AGAP11Q8TF27 550 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 CCT6BQ92526 530 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 GAL3ST3Q96A11 431 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 REPS1Q96D71 796 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 MTFMTQ96DP5 389 aaKnown RBP15.57■□□□□ 0.08
NEK9-211ENST00000557673 PEX11GQ96HA9 241 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 PKNOX2Q96KN3 472 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 ATP6V1G3Q96LB4 118 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 GPR137Q96N19 417 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 UTP23Q9BRU9 249 aaKnown RBP15.57■□□□□ 0.08
NEK9-211ENST00000557673 GATA5Q9BWX5 397 aaPredicted RBP15.57■□□□□ 0.08
NEK9-211ENST00000557673 MS4A8Q9BY19 250 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 ITGB1BP2Q9UKP3 347 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 DCHS2Q6V1P9 2916 aa15.57■□□□□ 0.08
NEK9-211ENST00000557673 FAM227AF5H4B4 570 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 CDC123O75794 336 aaPredicted RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 SEC24DO94855 1032 aaPredicted RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 OR4F21O95013 312 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 CD46P15529 392 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 ALOX12P18054 663 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 PIK3CBP42338 1070 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 PKNOX1P55347 436 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 STXBP1P61764 594 aaKnown RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 ADORA2A-AS1P86434 159 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 PMP22Q01453 160 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 ALDH6A1Q02252 535 aaKnown RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 DDX39BQ13838 428 aaKnown RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 MEP1AQ16819 746 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 C10orf62Q5T681 223 aaPredicted RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 FAM219BQ5XKK7 198 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 H3F3CQ6NXT2 135 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 Q6ZPB1 254 aaPredicted RBP15.56■□□□□ 0.08
NEK9-211ENST00000557673 ABHD13Q7L211 337 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 MILR1Q7Z6M3 343 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 EID3Q8N140 333 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 RNF175Q8N4F7 328 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 TMEM178AQ8NBL3 297 aa15.56■□□□□ 0.08
NEK9-211ENST00000557673 FAM98AQ8NCA5 519 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms