RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 HNRNPFP52597 415 aaKnown RBP11.7□□□□□ -0.54
SLIRP-211ENST00000557623 NAGLUP54802 743 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 TNFRSF17Q02223 184 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 STX4Q12846 297 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 ABHD17BQ5VST6 288 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 SLC6A19Q695T7 634 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 H3F3CQ6NXT2 135 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 LINC00696Q6ZRV3 163 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 FRMD7Q6ZUT3 714 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 SIRT6Q8N6T7 355 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 ZNF511Q8NB15 262 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 TMEM52Q8NDY8 209 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 METTL6Q8TCB7 284 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 TANKQ92844 425 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 ZNF354BQ96LW1 612 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 ZNF717Q9BY31 904 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-211ENST00000557623 EPN3Q9H201 632 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 RPF2Q9H7B2 306 aaKnown RBP11.7□□□□□ -0.54
SLIRP-211ENST00000557623 WDR41Q9HAD4 459 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 ZBTB20Q9HC78 741 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-211ENST00000557623 MID1IP1Q9NPA3 183 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 ADAP2Q9NPF8 381 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 ABI3Q9P2A4 366 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 SLC12A4Q9UP95 1085 aa11.7□□□□□ -0.54
SLIRP-211ENST00000557623 TTLL8A6PVC2 850 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 A8MUA0 341 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 J3QKU1 62 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 MANBAO00462 879 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 TRIM13O60858 407 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 GUCY1B2O75343 617 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 FAM58BPP0C7Q3 252 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 ARG2P78540 354 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 TLE1Q04724 770 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 ZNF844Q08AG5 666 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 CSTF3Q12996 717 aaKnown RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 ELAVL1Q15717 326 aaKnown RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 MEP1AQ16819 746 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 MRM1Q6IN84 353 aaKnown RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 Q6ZS92 163 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 CLNKQ7Z7G1 428 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 METTL4Q8N3J2 472 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 TMEM132CQ8N3T6 1108 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 SLC5A8Q8N695 610 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 GBP7Q8N8V2 638 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 B3GNT7Q8NFL0 401 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 DNAJB14Q8TBM8 379 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 ELP5Q8TE02 316 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 AGAP11Q8TF27 550 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 SREK1Q8WXA9 508 aaKnown RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 FAM111AQ96PZ2 611 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 ALOXE3Q9BYJ1 711 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 RNF32Q9H0A6 362 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 ILKAPQ9H0C8 392 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 C12orf65Q9H3J6 166 aaKnown RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 PNO1Q9NRX1 252 aaKnown RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 FARSBQ9NSD9 589 aaKnown RBP11.69□□□□□ -0.54
SLIRP-211ENST00000557623 VPS29Q9UBQ0 182 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 VTI1BQ9UEU0 232 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 BSNQ9UPA5 3926 aa11.69□□□□□ -0.54
SLIRP-211ENST00000557623 SMG1Q96Q15 3661 aaKnown RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 SERTM1A2A2V5 107 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 A8MUI8 341 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CDK2AP1O14519 115 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 PROM1O43490 865 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 TMPRSS11DO60235 418 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 LDB3O75112 727 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 SPAG7O75391 227 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 EEDO75530 441 aaKnown RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CRCPO75575 148 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 MYO1DO94832 1006 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 SORBS2O94875 1100 aaKnown RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 IFNA16P05015 189 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 KLK1P06870 262 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 MYZAPP0CAP1 466 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 NR2F6P10588 404 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CD97P48960 835 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CLCN2P51788 898 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 HNRNPH2P55795 449 aaKnown RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 PCLAFQ15004 111 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 TLR1Q15399 786 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CEP85LQ5SZL2 805 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CCNYL2Q5T2Q4 361 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 B3GNTL1Q67FW5 361 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 LRIG3Q6UXM1 1119 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 C10orf107Q8IVU9 208 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 IQCKQ8N0W5 287 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 LGI4Q8N135 537 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 TCP10LQ8TDR4 215 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 HAS2Q92819 552 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 DAZLQ92904 295 aaKnown RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 VMP1Q96GC9 406 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CNDP1Q96KN2 507 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 ZIM3Q96PE6 472 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 TRMOQ9BU70 441 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 MRPL1Q9BYD6 325 aaKnown RBP11.68□□□□□ -0.54
SLIRP-211ENST00000557623 STMN3Q9NZ72 180 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 ATG4BQ9Y4P1 393 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 ASB4Q9Y574 426 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms