RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 HSD17B1P14061 328 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 NTSP30990 170 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 TLX1P31314 330 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 GCGRP47871 477 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 AVPR1BP47901 424 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 HBA1P69905 142 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 SHC2P98077 582 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 ACY1Q03154 408 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 GAB1Q13480 694 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 TRA2AQ13595 282 aaKnown RBP eCLIP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 COL9A2Q14055 689 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 SPIDRQ14159 915 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 KPNB1Q14974 876 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 YOD1Q5VVQ6 348 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 TLDC1Q6P9B6 456 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 ZNF621Q6ZSS3 439 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 WDR60Q8WVS4 1066 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 ZBED6CLQ96FA7 236 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 DENND2DQ9H6A0 471 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 CLK4Q9HAZ1 481 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 SLAMF7Q9NQ25 335 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 CUTCQ9NTM9 273 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 ACSS1Q9NUB1 689 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 GIMAP4Q9NUV9 329 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 FAM86C1Q9NVL1 165 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 GMPR2Q9P2T1 348 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 SERTAD3Q9UJW9 196 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 PCDHGB4Q9UN71 923 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 POMPQ9Y244 141 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 BDP1A6H8Y1 2624 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 TTC28Q96AY4 2481 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 ASXL3Q9C0F0 2248 aa13.67□□□□□ -0.22
ARHGEF40-208ENST00000557498 UNC13CQ8NB66 2214 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 H0YIG0 161 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 ABCB1P08183 1280 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 NBL1P41271 181 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 GSK3BP49841 420 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 LIPEQ05469 1076 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 MLC1Q15049 377 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 FAM214AQ32MH5 1076 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 AASDHQ4L235 1098 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 PHF19Q5T6S3 580 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 C1orf146Q5VVC0 180 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 FAM180BQ6P0A1 224 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 CYB5D1Q6P9G0 228 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 GPR135Q8IZ08 494 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 DTWD1Q8N5C7 304 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 FAM156AQ8NDB6 213 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 RCBTB1Q8NDN9 531 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 ZFP28Q8NHY6 868 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 ADAMTS18Q8TE60 1221 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 AURKBQ96GD4 344 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 THUMPD3Q9BV44 507 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 ALG2Q9H553 416 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 IKZF5Q9H5V7 419 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 FGF21Q9NSA1 209 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 SIDT1Q9NXL6 827 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 TAS2R9Q9NYW1 312 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 PSME2Q9UL46 239 aa13.66□□□□□ -0.22
ARHGEF40-208ENST00000557498 COL27A1Q8IZC6 1860 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 WASHC1A8K0Z3 465 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 MYO1GB0I1T2 1018 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CLIC1O00299 241 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CYR61O00622 381 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CHST10O43529 356 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 ERAL1O75616 437 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CSNK2A2P19784 350 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 TCN1P20061 433 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 PPIBP23284 216 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 SOAT1P35610 550 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 ARSFP54793 590 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 MANFP55145 182 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 ACTR3P61158 418 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 SIM1P81133 766 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 BNIP2Q12982 314 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CEBPEQ15744 281 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 GPR155Q7Z3F1 870 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 TRIML2Q8N7C3 387 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 ZFP90Q8TF47 636 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 ASB9Q96DX5 294 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 MVB12AQ96EY5 273 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CNRIP1Q96F85 164 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 ZNF681Q96N22 645 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 AMDHD1Q96NU7 426 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 BBS4Q96RK4 519 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CDC6Q99741 560 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 ECSITQ9BQ95 431 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 NDC1Q9BTX1 674 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 TRIM4Q9C037 500 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 GLIPR2Q9H4G4 154 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 RPF2Q9H7B2 306 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CXorf36Q9H7Y0 433 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 NEUROD4Q9HD90 331 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 HCN3Q9P1Z3 774 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 CLCA2Q9UQC9 943 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 GMEB1Q9Y692 573 aa13.65□□□□□ -0.22
ARHGEF40-208ENST00000557498 C4orf47A7E2U8 309 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms