RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 E7EVH7 732 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 KLRC4-KLRK1H3BQV0 150 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 PROM1O43490 865 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 PEX1O43933 1283 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 KIF5CO60282 957 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 SYF2O95926 243 aaKnown RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 CATP04040 527 aaKnown RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 RAC2P15153 192 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 NMBRP28336 390 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 FMO4P31512 558 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 HSD17B2P37059 387 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 FDFT1P37268 417 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 COILP38432 576 aaPredicted RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 CETN2P41208 172 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 RPS15AP62244 130 aaKnown RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 SNTB1Q13884 538 aaKnown RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 KCNJ11Q14654 390 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 TYSND1Q2T9J0 566 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 KLHL38Q2WGJ6 581 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ANKRD39Q53RE8 183 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 THEMIS2Q5TEJ8 643 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ARHGAP11AQ6P4F7 1023 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 MDGA2Q7Z553 956 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 PRUNE1Q86TP1 453 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 CNGA4Q8IV77 575 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 REXO1L1PQ8IX06 675 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ZZZ3Q8IYH5 903 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ZFP62Q8NB50 900 aaPredicted RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ADCY4Q8NFM4 1077 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 OR5M3Q8NGP4 307 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 C16orf52Q8NHV5 167 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ATG4AQ8WYN0 398 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 LPGAT1Q92604 370 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 RMND5BQ96G75 393 aaPredicted RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 PEX11GQ96HA9 241 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 OR1F2PQ96R84 312 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ANKHQ9HCJ1 492 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 PNPLA3Q9NST1 481 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 H2AFY2Q9P0M6 372 aaPredicted RBP5.45□□□□□ -1.54
VPS33B-207ENST00000557470 SLC13A4Q9UKG4 626 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 SOX13Q9UN79 622 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 CORO2BQ9UQ03 480 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 SH2B3Q9UQQ2 575 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 NAALAD2Q9Y3Q0 740 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 FAM215AQ9Y5M1 114 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 DUSP10Q9Y6W6 482 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 COL6A5A8TX70 2615 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF407Q9C0G0 2248 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 SCN3AQ9NY46 2000 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 CSPG4Q6UVK1 2322 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ATRQ13535 2644 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 FBN1P35555 2871 aaKnown RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 FEZF1A0PJY2 475 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 PRAMEF27A3QJZ7 478 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SAGE2PA6NJ88 616 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 A6NLC8 198 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 FAM166BA8MTA8 275 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 AKR1B15C9JRZ8 316 aaPredicted RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 GOLGA8KD6RF30 607 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 NPIPA2E9PIF3 369 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 NPIPA3F8WFD2 350 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 H3BMM5 538 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 GOLGA8TH3BQL2 631 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 FCHO1O14526 889 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 FRS3O43559 492 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 LCMT2O60294 686 aaKnown RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 B4GALT2O60909 372 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 DNAJB6O75190 326 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 UBOX5O94941 541 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 VAPBO95292 243 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 IFNB1P01574 187 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ESR1P03372 595 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SCG5P05408 212 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 APRTP07741 180 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 FHP07954 510 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 GLI4P10075 376 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ETS1P14921 441 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CHRM3P20309 590 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CD247P20963 164 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 IL10P22301 178 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 DNASE1P24855 282 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ACVR2AP27037 513 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 IMPA1P29218 277 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 LSP1P33241 339 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ECI1P42126 302 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SKIV2L2P42285 1042 aaKnown RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 MECP2P51608 486 aaKnown RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 DGKQP52824 942 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SESN2P58004 480 aaPredicted RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ETF1P62495 437 aaKnown RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 OLR1P78380 273 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CUL1Q13616 776 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CNN3Q15417 329 aaKnown RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SPA17Q15506 151 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 GXYLT1Q4G148 440 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 PCID2Q5JVF3 399 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CES3Q6UWW8 571 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ARSKQ6UWY0 536 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ASPGQ86U10 573 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 BIVMQ86UB2 503 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms