RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 SLC16A8O95907 504 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 CYP17A1P05093 508 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 C1GALT1C1LP0DN25 315 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 CPEP16870 476 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 PTBP1P26599 531 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHMT2-231ENST00000557433 IRS1P35568 1242 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SOX3P41225 446 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SLC9A3P48764 834 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 XKP51811 444 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SEMG2Q02383 582 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 ZNF91Q05481 1191 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 COX10Q12887 443 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 HEPACAMQ14CZ8 416 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SLC35F1Q5T1Q4 408 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 PDZK1Q5T2W1 519 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 FAM131AQ6UXB0 335 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 CD300LDQ6UXZ3 194 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 TMPRSS11BQ86T26 416 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 PEX5LQ8IYB4 626 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 OR7G1Q8NGA0 311 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 CREB3L4Q8TEY5 395 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 BHMTQ93088 406 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 NEIL2Q969S2 332 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 RNF170Q96K19 258 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 FRMD6Q96NE9 622 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SAMD11Q96NU1 681 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 ZDHHC6Q9H6R6 413 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 HCN2Q9UL51 889 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 KLHL20Q9Y2M5 609 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 PRRG1O14668 218 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 NPC1O15118 1278 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 HCN1O60741 890 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 TBX19O60806 448 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 GUCY1B2O75343 617 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 RECKO95980 971 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 H1F0P07305 194 aaKnown RBP15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SOAT1P35610 550 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 PRLHRP49683 370 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 GNG2P59768 71 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SLC7A9P82251 487 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 TRIM60Q495X7 471 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 YIF1BQ5BJH7 314 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 CST9Q5W186 159 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 SYCE2Q6PIF2 218 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 GDPD4Q6W3E5 623 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 CCDC149Q6ZUS6 474 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 ARMCX6Q7L4S7 300 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 TCTE3Q8IZS6 198 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 IL4I1Q96RQ9 567 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 TSSK6Q9BXA6 273 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 POLDIP3Q9BY77 421 aaKnown RBP15.51■□□□□ 0.07
SHMT2-231ENST00000557433 C11orf16Q9NQ32 467 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 KLHL21Q9UJP4 597 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 MAU2Q9Y6X3 613 aa15.51■□□□□ 0.07
SHMT2-231ENST00000557433 THSD7BQ9C0I4 1608 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 TRBV4-1A0A0J9YWV2 114 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 FABP12A6NFH5 140 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 H3BM21 787 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 RAB36O95755 333 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 MYL9P24844 172 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 ELAVL4P26378 380 aaKnown RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 ERP29P30040 261 aaKnown RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 DGKGP49619 791 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 RAB33AQ14088 237 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 MPEG1Q2M385 716 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 ZNF284Q2VY69 593 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 KLHL22Q53GT1 634 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 HENMT1Q5T8I9 393 aaKnown RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 METAP1DQ6UB28 335 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 DPY19L3Q6ZPD9 716 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 TCEAL8Q8IYN2 117 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 CACTIN-AS1Q8N1I8 211 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 VANGL1Q8TAA9 524 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 CIDECQ96AQ7 238 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 NEURL3Q96EH8 262 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 IGSF21Q96ID5 467 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 POLR2J3Q9H1A7 115 aaKnown RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 RNF121Q9H920 327 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 TXNL4BQ9NX01 149 aaKnown RBP15.5■□□□□ 0.07
SHMT2-231ENST00000557433 ACSL6Q9UKU0 697 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 ACAD8Q9UKU7 415 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 SNX11Q9Y5W9 270 aa15.5■□□□□ 0.07
SHMT2-231ENST00000557433 COL4A6Q14031 1691 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 PIPSLA2A3N6 862 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 SNTNA6NMZ2 147 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 AP3D1O14617 1153 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 FFAR1O14842 300 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 PROM1O43490 865 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 MTX2O75431 263 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 CYP7B1O75881 506 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 CDRT1O95170 752 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 SOD2P04179 222 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 HBQ1P09105 142 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 CKMT1AP12532 417 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 CPN2P22792 545 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 BDKRB1P46663 353 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 TAS2R50P59544 299 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 PRKCZQ05513 592 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 SREBF2Q12772 1141 aa15.49■□□□□ 0.07
SHMT2-231ENST00000557433 SLBPQ14493 270 aaKnown RBP eCLIP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms