RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PRKNO60260 465 aaPredicted RBP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 SUPT7LO94864 414 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 GBAP04062 536 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 MLF1P58340 268 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 TNFRSF17Q02223 184 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 SRSF11Q05519 484 aaKnown RBP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 OR1C1Q15619 314 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 INAQ16352 499 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 SGO1Q5FBB7 561 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 ZNF766Q5HY98 468 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 OR4N5Q8IXE1 308 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 ARMC10Q8N2F6 343 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 THAP3Q8WTV1 239 aaPredicted RBP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 PTPMT1Q8WUK0 201 aaPredicted RBP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 VMP1Q96GC9 406 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 SERPINI1Q99574 410 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 SLX1AQ9BQ83 275 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 UTP23Q9BRU9 249 aaKnown RBP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 DEFB126Q9BYW3 111 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 VTI1BQ9UEU0 232 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 PHF11Q9UIL8 331 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 ASB4Q9Y574 426 aa19.12■□□□□ 0.65
VTI1B-205ENST00000555543 V9GYY5 206 aaPredicted RBP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 USP9YO00507 2555 aaPredicted RBP19.12■□□□□ 0.65
VTI1B-205ENST00000555543 BLACEA4D250 179 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 ANKUB1A6NFN9 424 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 NEURL1O76050 574 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 OR4F21O95013 312 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 SEMA3DO95025 777 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 CLCN2P51788 898 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 PRKAA2P54646 552 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 IGLV3-21P80748 117 aaPredicted RBP19.11■□□□□ 0.65
VTI1B-205ENST00000555543 PMP22Q01453 160 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 IFT88Q13099 833 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 TCHHL1Q5QJ38 904 aaPredicted RBP19.11■□□□□ 0.65
VTI1B-205ENST00000555543 ZNF324BQ6AW86 544 aaPredicted RBP19.11■□□□□ 0.65
VTI1B-205ENST00000555543 SPINK14Q6IE38 97 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 NUDT13Q86X67 352 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 BCORP1Q8N888 145 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 ZNF321PQ8N8H1 164 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 OR2W6PQ8NHA6 318 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 SUN3Q8TAQ9 357 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 MRPL1Q9BYD6 325 aaKnown RBP19.11■□□□□ 0.65
VTI1B-205ENST00000555543 ELOVL6Q9H5J4 265 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 RPF2Q9H7B2 306 aaKnown RBP19.11■□□□□ 0.65
VTI1B-205ENST00000555543 PPCSQ9HAB8 311 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 TRPS1Q9UHF7 1281 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 DCDC2Q9UHG0 476 aa19.11■□□□□ 0.65
VTI1B-205ENST00000555543 A0A1W2PR48 441 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 SYNDIG1LA6NDD5 238 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 WASHC1A8K0Z3 465 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 G3V2L1 256 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 PROM1O43490 865 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 GLRA3O75311 464 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 SEMA7AO75326 666 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 SLU7O95391 586 aaKnown RBP19.1■□□□□ 0.65
VTI1B-205ENST00000555543 DDAH2O95865 285 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 PDYNP01213 254 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 FAM58BPP0C7Q3 252 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 KRT15P19012 456 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 IMPDH1P20839 514 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 OC90Q02509 493 aaPredicted RBP19.1■□□□□ 0.65
VTI1B-205ENST00000555543 SERTAD2Q14140 314 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 RASA2Q15283 850 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 C10orf62Q5T681 223 aaPredicted RBP19.1■□□□□ 0.65
VTI1B-205ENST00000555543 ZNF227Q86WZ6 799 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 CNPY4Q8N129 248 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 TMEM132CQ8N3T6 1108 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 ST6GALNAC3Q8NDV1 305 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 PRR7Q8TB68 274 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 SREK1Q8WXA9 508 aaKnown RBP19.1■□□□□ 0.65
VTI1B-205ENST00000555543 UCN3Q969E3 161 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 L3HYPDHQ96EM0 354 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 ZNF382Q96SR6 550 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 HBEGFQ99075 208 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 C12orf65Q9H3J6 166 aaKnown RBP19.1■□□□□ 0.65
VTI1B-205ENST00000555543 KLHL1Q9NR64 748 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 OLAHQ9NV23 265 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 LYARQ9NX58 379 aaKnown RBP19.1■□□□□ 0.65
VTI1B-205ENST00000555543 MS4A12Q9NXJ0 267 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 CLCA3PQ9Y6N3 262 aa19.1■□□□□ 0.65
VTI1B-205ENST00000555543 SPTAN1Q13813 2472 aaKnown RBP19.09■□□□□ 0.65
VTI1B-205ENST00000555543 GLOD5A6NK44 160 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 TMEM200CA6NKL6 621 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 RASAL1O95294 804 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 AIFM1O95831 613 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 PROCP04070 461 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 NR2F6P10588 404 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 TDGF1P3P51864 188 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 FOLH1Q04609 750 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 FHL5Q5TD97 284 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 CYP20A1Q6UW02 462 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 C16orf47Q6ZP98 133 aaPredicted RBP19.09■□□□□ 0.65
VTI1B-205ENST00000555543 DGAT2L6Q6ZPD8 337 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 SLC22A9Q8IVM8 553 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 CDYL2Q8N8U2 506 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 MYRIPQ8NFW9 859 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 OR14A16Q8NHC5 309 aa19.09■□□□□ 0.65
VTI1B-205ENST00000555543 AENQ8WTP8 325 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms