RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 Q8NA96 180 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 APIPQ96GX9 242 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 TRIM4Q9C037 500 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF395Q9H8N7 513 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-214ENST00000554928 FIS1Q9Y3D6 152 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF451Q9Y4E5 1061 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF462Q96JM2 2506 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 DOCK10Q96BY6 2186 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 SAGE2PA6NJ88 616 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 A8MUI8 341 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 PCDH17O14917 1159 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 PGRMC2O15173 223 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 PRKNO60260 465 aaPredicted RBP11.55□□□□□ -0.56
SYNE2-214ENST00000554928 MYO1DO94832 1006 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 KRT6AP02538 564 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 KRT6BP04259 564 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 TSFMP43897 325 aaKnown RBP11.55□□□□□ -0.56
SYNE2-214ENST00000554928 KRT6CP48668 564 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 HSD17B7P56937 341 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 BTKQ06187 659 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 C19orf57Q0VDD7 668 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 KLRB1Q12918 225 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF750Q32MQ0 723 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 PRR30Q53SZ7 412 aaPredicted RBP11.55□□□□□ -0.56
SYNE2-214ENST00000554928 ARL13AQ5H913 290 aaPredicted RBP11.55□□□□□ -0.56
SYNE2-214ENST00000554928 SLC6A19Q695T7 634 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 CYP20A1Q6UW02 462 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 PRICKLE2Q7Z3G6 844 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 CUZD1Q86UP6 607 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 CATSPER1Q8NEC5 780 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 OR6Y1Q8NGX8 325 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 ADAMTS18Q8TE60 1221 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 CHTF18Q8WVB6 975 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 PPWD1Q96BP3 646 aaKnown RBP11.55□□□□□ -0.56
SYNE2-214ENST00000554928 PGM2Q96G03 612 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 LPAR4Q99677 370 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 CENPKQ9BS16 269 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 ALOXE3Q9BYJ1 711 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 EPN3Q9H201 632 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 TUBB1Q9H4B7 451 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 BRF2Q9HAW0 419 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 TMBIM4Q9HC24 238 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 C5AR2Q9P296 337 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 MID2Q9UJV3 735 aa11.55□□□□□ -0.56
SYNE2-214ENST00000554928 HRKO00198 91 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 CLDN4O14493 209 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 ITM2AO43736 263 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 SLC28A2O43868 658 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 ULK1O75385 1050 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 LYPLA1O75608 230 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 DHRS4L1P0CG22 281 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 NR2F6P10588 404 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 PTGER1P34995 402 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 SERPINB4P48594 390 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 GPR143P51810 404 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 ARFIP1P53367 373 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 MLLT10P55197 1068 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 IGLV3-21P80748 117 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 FOLH1Q04609 750 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 CSTF3Q12996 717 aaKnown RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 MFAP5Q13361 173 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 PLEKHN1Q494U1 663 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 CCNYL2Q5T2Q4 361 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 C10orf62Q5T681 223 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 AGAP7PQ5VUJ5 663 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 ISLR2Q6UXK2 745 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 C16orf47Q6ZP98 133 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 CRLF3Q8IUI8 442 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 TEX19Q8NA77 164 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 OR2T11Q8NH01 316 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 M1APQ8TC57 530 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 AGR3Q8TD06 166 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 ELP5Q8TE02 316 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 PTPMT1Q8WUK0 201 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 ARL8AQ96BM9 186 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 VPS50Q96JG6 964 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 AGAP4Q96P64 663 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 EBPLQ9BY08 206 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 RPF2Q9H7B2 306 aaKnown RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 KCNK13Q9HB14 408 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 SSU72Q9NP77 194 aaKnown RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 MMP25Q9NPA2 562 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 LYARQ9NX58 379 aaKnown RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 SENP1Q9P0U3 644 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 VPS29Q9UBQ0 182 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 PHF11Q9UIL8 331 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 MRPS33Q9Y291 106 aaKnown RBP11.54□□□□□ -0.56
SYNE2-214ENST00000554928 STK38LQ9Y2H1 464 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 CCL27Q9Y4X3 112 aa11.54□□□□□ -0.56
SYNE2-214ENST00000554928 AZIN1O14977 448 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 NPHS1O60500 1241 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 SORBS2O94875 1100 aaKnown RBP11.53□□□□□ -0.56
SYNE2-214ENST00000554928 WDPCPO95876 746 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 IFNA16P05015 189 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 HSD3B1P14060 373 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 PLA2G2AP14555 144 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 H2AFXP16104 143 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-214ENST00000554928 HSD3B2P26439 372 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms