RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TSSK3Q96PN8 268 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SLC22A12Q96S37 553 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 APOL4Q9BPW4 351 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 C2orf49Q9BVC5 232 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 TMPRSS13Q9BYE2 586 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CIPCQ9C0C6 399 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 OR2B2Q9GZK3 357 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PCBD2Q9H0N5 130 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 RSPH9Q9H1X1 276 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 CYP4F11Q9HBI6 524 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PRDM7Q9NQW5 492 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 SLCO1C1Q9NYB5 712 aa3.27□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF107Q9UII5 783 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 PPIEQ9UNP9 301 aaKnown RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 HEMK1Q9Y5R4 338 aaPredicted RBP3.27□□□□□ -1.89
SEC23A-207ENST00000554615 FAM172BPA6NC97 362 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MAGEB17A8MXT2 336 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SUPT3HB4E1H0 165 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CLIC1O00299 241 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NEMP1O14524 444 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 RGS10O43665 173 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 POMCP01189 267 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 OR4Q2P0C623 313 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 DBTP11182 482 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CYP2A6P11509 494 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ITGA2P17301 1181 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SAT1P21673 171 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 THPOP40225 353 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 DGKQP52824 942 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 RAD23AP54725 363 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TAP2Q03519 686 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CHRNB3Q05901 458 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PTGR1Q14914 329 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MAPKAPK3Q16644 382 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 GRAMD1BQ3KR37 738 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ARHGAP11BQ3KRB8 267 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ELFN2Q5R3F8 820 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 FAM182AQ5T1J6 154 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ATAD3BQ5T9A4 648 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 OLFML2AQ68BL7 652 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF529Q6P280 563 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TMPRSS11FQ6ZWK6 438 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 WDR53Q7Z5U6 358 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MILR1Q7Z6M3 343 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 LDB1Q86U70 411 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 RNF113BQ8IZP6 322 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ADGRG2Q8IZP9 1017 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NLGN4XQ8N0W4 816 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 DEPDC4Q8N2C3 294 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SLC44A3Q8N4M1 653 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PARP16Q8N5Y8 322 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 GDPD1Q8N9F7 314 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ANKRD53Q8N9V6 530 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 FAM120BQ96EK7 910 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PRRC1Q96M27 445 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SLA2Q9H6Q3 261 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SMURF2Q9HAU4 748 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NANSQ9NR45 359 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 KLHL13Q9P2N7 655 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 FBLN5Q9UBX5 448 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TIMM13Q9Y5L4 95 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PEX16Q9Y5Y5 336 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MRPL42Q9Y6G3 142 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TRANK1O15050 2925 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 A0A0G2JPF8 293 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 HNRNPCL2B2RXH8 293 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 HNRNPCL3B7ZW38 293 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ANHXE9PGG2 379 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 BET1O15155 118 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PLA2G10O15496 165 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PLPP2O43688 288 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ULK1O75385 1050 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZBTB11O95625 1053 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 CST1P01037 141 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NGFRP08138 427 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 HNRNPCL4P0DMR1 293 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ACP2P11117 423 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NID1P14543 1247 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 SPNP16150 400 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 NCK1P16333 377 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ENGP17813 658 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ITGALP20701 1170 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 S1PR1P21453 382 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 GABRA5P31644 462 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PPM1AP35813 382 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 RBM34P42696 430 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 FLT3LGP49771 235 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 C21orf59P57076 290 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 MTPNP58546 118 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 TAS2R38P59533 333 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 RPS24P62847 133 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 PRAMEP78395 509 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 IL1RL1Q01638 556 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 HSPA14Q0VDF9 509 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 EFEMP1Q12805 493 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF177Q13360 481 aaPredicted RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 KRR1Q13601 381 aaKnown RBP3.26□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF235Q14590 738 aa3.26□□□□□ -1.89
SEC23A-207ENST00000554615 DGUOKQ16854 277 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms