RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 GPR156Q8NFN8 814 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 OR6C4Q8NGE1 309 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ENKURQ8TC29 256 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 QRFPRQ96P65 431 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PPIL3Q9H2H8 161 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZDHHC6Q9H6R6 413 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PPP1R3EQ9H7J1 279 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 NDUFB11Q9NX14 153 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 GLTPQ9NZD2 209 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 REV1Q9UBZ9 1251 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PCDHB11Q9Y5F2 797 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MYO10Q9HD67 2058 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PLXND1Q9Y4D7 1925 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 IQCMA0A1B0GVH7 501 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 A0A1B0GVM2 712 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 OR6C75A6NL08 312 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 H7C4K7 107 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 HAX1O00165 279 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 SAP18O00422 153 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CA12O43570 354 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 VNN2O95498 520 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 LALBAP00709 142 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 OR12D1P0DN82 309 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ICAM2P13598 275 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ARSBP15848 533 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 POLR2CP19387 275 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CXCL3P19876 107 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CPN2P22792 545 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PSMA1P25786 263 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ITGB7P26010 798 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 HLA-DMAP28067 261 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 SSTR2P30874 369 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CRISP1P54107 249 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 RAB8AP61006 207 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 RPS26P62854 115 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 TLE2Q04725 743 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF91Q05481 1191 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CSTF3Q12996 717 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF267Q14586 743 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CHRNA6Q15825 494 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CCDC85BQ15834 202 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MPEG1Q2M385 716 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF628Q5EBL2 1059 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 RPS26P11Q5JNZ5 115 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CNIH2Q6PI25 160 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 XKRXQ6PP77 449 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PLET1Q6UQ28 207 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 OLIG3Q7RTU3 272 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 TECPR1Q7Z6L1 1165 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 LIX1LQ8IVB5 337 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 OR8H3Q8N146 312 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 Q8N402 240 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CPA6Q8N4T0 437 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 DNAJC5GQ8N7S2 189 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PIH1D2Q8WWB5 315 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MSLNLQ96KJ4 702 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MAGEB10Q96LZ2 347 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZSCAN5AQ9BUG6 496 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 RACGAP1Q9H0H5 632 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MAGEH1Q9H213 219 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 SLC32A1Q9H598 525 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 HEXA-AS1Q9H8Q6 139 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF556Q9HAH1 456 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZFYVE1Q9HBF4 777 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 EIF3KQ9UBQ5 218 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 TMCC3Q9ULS5 477 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 STUB1Q9UNE7 303 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 POFUT2Q9Y2G5 429 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MAP4K5Q9Y4K4 846 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 TRPM7Q96QT4 1865 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 H3BUI4 141 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 H7C0S8 307 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 I3L521 148 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 COCHO43405 550 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 SMAD6O43541 496 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PRKYO43930 277 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PSIP1O75475 530 aaKnown RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PAHP00439 452 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CFDP00746 253 aaPredicted RBP4.63□□□□□ -1.67
LIMA1-214ENST00000552783 TRBC1P01850 177 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PDGFAP04085 211 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 GSTM1P09488 218 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ACADMP11310 421 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PRPS2P11908 318 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 NAGAP17050 411 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 BPIP17213 487 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 PRPS1L1P21108 318 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 HMGCLP35914 325 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MAP2K3P46734 347 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 AVPR1BP47901 424 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 MAPKAPK2P49137 400 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 FCHO2Q0JRZ9 810 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 LRRC74AQ0VAA2 488 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CHIT1Q13231 466 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 VEZF1Q14119 521 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 FCN2Q15485 313 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 TEAD4Q15561 434 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 CCSMST1Q4G0I0 132 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ATAT1Q5SQI0 421 aa4.63□□□□□ -1.67
LIMA1-214ENST00000552783 ZBTB37Q5TC79 503 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms