RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ADGRE4PQ86SQ3 457 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CEP57Q86XR8 500 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PRR18Q8N4B5 295 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF615Q8N8J6 731 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CDYL2Q8N8U2 506 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 LPCAT1Q8NF37 534 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FLCNQ8NFG4 579 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SUN3Q8TAQ9 357 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PNPT1Q8TCS8 783 aaKnown RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 EEF1AKMT1Q8WVE0 214 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ADAMTS14Q8WXS8 1223 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 HGDQ93099 445 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM41AQ96HV5 264 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CCDC74BQ96LY2 380 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 GPR21Q99679 349 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 UNKQ9C0B0 810 aaKnown RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 UGT1A7Q9HAW7 530 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 UGT1A10Q9HAW8 530 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 IL1RL2Q9HB29 575 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FBRSL1Q9HCM7 1045 aaKnown RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CALML5Q9NZT1 146 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ZDHHC2Q9UIJ5 367 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TEX13CA0A0J9YWL9 993 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FRG2CA6NGY1 282 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 GRXCR1A8MXD5 290 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 MAGEB17A8MXT2 336 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 MID1O15344 667 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 NDUFS3O75489 264 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PAX1P15863 534 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ELK4P28324 431 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CD38P28907 300 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CD1CP29017 333 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SLC7A1P30825 629 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 NTF4P34130 210 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ISL1P61371 349 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RPS4XP62701 263 aaKnown RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 BDH1Q02338 343 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SGCGQ13326 291 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 C2CD6Q53TS8 623 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 LETMD1Q6P1Q0 360 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 MED27Q6P2C8 311 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SCYL2Q6P3W7 929 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 AGTRAPQ6RW13 159 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RIPOR1Q6ZS17 1223 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ESPNLQ6ZVH7 1005 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PAGE2Q7Z2X7 111 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TMPRSS12Q86WS5 348 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 DSELQ8IZU8 1212 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 MARVELD2Q8N4S9 558 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ATG16L2Q8NAA4 619 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PLA2G15Q8NCC3 412 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SIMC1Q8NDZ2 872 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PIK3C3Q8NEB9 887 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FAM136AQ96C01 138 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TM4SF18Q96CE8 201 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 DDOQ99489 341 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RHOXF2Q9BQY4 288 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM43Q9BTV4 400 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 REEP4Q9H6H4 257 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 MMP25Q9NPA2 562 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 AGPAT4Q9NRZ5 378 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF275Q9NSD4 429 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TMEFF2Q9UIK5 374 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SNX13Q9Y5W8 968 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 MDC1Q14676 2089 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 POM121BA6NF01 834 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 URADA6NGE7 173 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 J3QL48 77 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 MAN1A2O60476 641 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 BCAS1O75363 584 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 NADKO95544 446 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 KRT6AP02538 564 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 KRT6BP04259 564 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 SYPP08247 313 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CD59P13987 128 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 POLR2CP19387 275 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CHMP24386 653 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 KRT6CP48668 564 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF763Q0D2J5 394 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ARHGEF7Q14155 803 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 NR0B2Q15466 257 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CYP27C1Q4G0S4 372 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 HSP90AA5PQ58FG0 334 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ARL13AQ5H913 290 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ENTPD8Q5MY95 495 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CDC73Q6P1J9 531 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 FDX2Q6P4F2 183 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TMPRSS7Q7RTY8 843 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 NAGSQ8N159 534 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ELP5Q8TE02 316 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 UTP15Q8TED0 518 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TWIST2Q8WVJ9 160 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 RIT1Q92963 219 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 LINGO1Q96FE5 620 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 CELF6Q96J87 481 aaKnown RBP4.6□□□□□ -1.67
SCAF11-212ENST00000549162 KCNC2Q96PR1 638 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 TUBA1CQ9BQE3 449 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 ASB8Q9H765 288 aa4.6□□□□□ -1.67
SCAF11-212ENST00000549162 MKKSQ9NPJ1 570 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms