RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ZFP36L2P47974 494 aaKnown RBP15.23■□□□□ 0.03
SSH1-208ENST00000548522 SLC6A12P48065 614 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 DR1Q01658 176 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 ID2Q02363 134 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 TSNQ15631 228 aaKnown RBP15.23■□□□□ 0.03
SSH1-208ENST00000548522 CEBPEQ15744 281 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 GLIPR1L2Q4G1C9 344 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 PRAMEF9Q5VWM5 478 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 PAOXQ6QHF9 649 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 TMIGD1Q6UXZ0 262 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 HSDL2Q6YN16 418 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 RTL4Q6ZR62 310 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 GK5Q6ZS86 529 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 TGIF2LYQ8IUE0 185 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 ZNF595Q8IYB9 648 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 FAM109AQ8N4B1 249 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 ANKRD49Q8WVL7 239 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 FOXC2Q99958 501 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 SH3GL2Q99962 352 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 FAM173AQ9BQD7 235 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 GPATCH1Q9BRR8 931 aaKnown RBP15.23■□□□□ 0.03
SSH1-208ENST00000548522 ERP44Q9BS26 406 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 NPLQ9BXD5 320 aaPredicted RBP15.23■□□□□ 0.03
SSH1-208ENST00000548522 TUBA8Q9NY65 449 aaPredicted RBP15.23■□□□□ 0.03
SSH1-208ENST00000548522 ASIC3Q9UHC3 531 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 CLCA3PQ9Y6N3 262 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 ABCA4P78363 2273 aa15.23■□□□□ 0.03
SSH1-208ENST00000548522 A0A1B0GVC2 190 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 OR14I1A6ND48 311 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 NCF1BA6NI72 391 aaPredicted RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 NCF1CA8MVU1 366 aaPredicted RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 DNALI1O14645 258 aaPredicted RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 BCKDKO14874 412 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 LDB3O75112 727 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 NCF1P14598 390 aaPredicted RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 KLK2P20151 261 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 ECHS1P30084 290 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 ELK3P41970 407 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 NDUFAF5Q5TEU4 345 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 ABHD17CQ6PCB6 329 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 LRIG3Q6UXM1 1119 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 RGS9BPQ6ZS82 235 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 FAM47EQ6ZV65 393 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 WDR53Q7Z5U6 358 aaPredicted RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 MMP21Q8N119 569 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 TMEM132CQ8N3T6 1108 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 OR2L5Q8NG80 312 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 GRK7Q8WTQ7 553 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 TMEM79Q9BSE2 394 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 REXO4Q9GZR2 422 aaKnown RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 GSX1Q9H4S2 264 aaPredicted RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 IL1RL2Q9HB29 575 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 PSD3Q9NYI0 1048 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 CORO1CQ9ULV4 474 aaPredicted RBP15.22■□□□□ 0.03
SSH1-208ENST00000548522 DAPP1Q9UN19 280 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 PLEKHA6Q9Y2H5 1048 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 OARD1Q9Y530 152 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 ABCA2Q9BZC7 2435 aa15.22■□□□□ 0.03
SSH1-208ENST00000548522 C17orf105B2RV13 164 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 AQP7O14520 342 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 ETHE1O95571 254 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 GNAZP19086 355 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 CD22P20273 847 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 CNR1P21554 472 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 PIGAP37287 484 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 TAS2R39P59534 338 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 RNF4P78317 190 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 FOLH1Q04609 750 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 FOXD4Q12950 439 aaPredicted RBP15.21■□□□□ 0.03
SSH1-208ENST00000548522 ADPRMQ3LIE5 342 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 C1orf185Q5T7R7 199 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 ADGRD1Q6QNK2 874 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 ARSKQ6UWY0 536 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 ZNF793Q6ZN11 406 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 OR14A16Q8NHC5 309 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 GABPB2Q8TAK5 448 aaPredicted RBP15.21■□□□□ 0.03
SSH1-208ENST00000548522 SLC2A12Q8TD20 617 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 RHBDF1Q96CC6 855 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 SERINC2Q96SA4 455 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 POLDIP3Q9BY77 421 aaKnown RBP15.21■□□□□ 0.03
SSH1-208ENST00000548522 ALOXE3Q9BYJ1 711 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 ALKBH4Q9NXW9 302 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 CRIM1Q9NZV1 1036 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 ST6GALNAC2Q9UJ37 374 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 ACAD8Q9UKU7 415 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 NFU1Q9UMS0 254 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 MRPS33Q9Y291 106 aaKnown RBP15.21■□□□□ 0.03
SSH1-208ENST00000548522 ATG4BQ9Y4P1 393 aa15.21■□□□□ 0.03
SSH1-208ENST00000548522 FAM95CA0A1B0GW59 222 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 KDM4EB2RXH2 506 aaPredicted RBP15.2■□□□□ 0.02
SSH1-208ENST00000548522 CTNSO60931 367 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 CLEC3AO75596 197 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 RFPL3SP0C7P2 107 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 MAN2A2P49641 1150 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 MTTPP55157 894 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 WNT3P56703 355 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 CDKL1Q00532 357 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 STEAP4Q687X5 459 aa15.2■□□□□ 0.02
SSH1-208ENST00000548522 TRIM40Q6P9F5 258 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms