RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ILKAPQ9H0C8 392 aaPredicted RBP15.77■□□□□ 0.12
CCDC38-203ENST00000546803 PFDN4Q9NQP4 134 aa15.77■□□□□ 0.12
CCDC38-203ENST00000546803 FIS1Q9Y3D6 152 aa15.77■□□□□ 0.12
CCDC38-203ENST00000546803 PCDHGB7Q9Y5F8 929 aa15.77■□□□□ 0.12
CCDC38-203ENST00000546803 CLDN16Q9Y5I7 305 aa15.77■□□□□ 0.12
CCDC38-203ENST00000546803 IGHV3-20A0A0C4DH32 117 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 A6NL46 340 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 SEC24DO94855 1032 aaPredicted RBP15.76■□□□□ 0.11
CCDC38-203ENST00000546803 PRPH2P23942 346 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 ITGA3P26006 1051 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 GSTM5P46439 218 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 SLC1A6P48664 564 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 STX4Q12846 297 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 TERF2Q15554 542 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 CES4AQ5XG92 561 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 C18orf63Q68DL7 685 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 JMJD6Q6NYC1 403 aaPredicted RBP15.76■□□□□ 0.11
CCDC38-203ENST00000546803 PARP9Q8IXQ6 854 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 FDCSPQ8NFU4 85 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 FAM76AQ8TAV0 307 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 RAB3IL1Q8TBN0 382 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 TWIST2Q8WVJ9 160 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 ALOXE3Q9BYJ1 711 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 LHPPQ9H008 270 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 ADAP2Q9NPF8 381 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 GPR83Q9NYM4 423 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 ZDHHC2Q9UIJ5 367 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 RAP2CQ9Y3L5 183 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 CCL27Q9Y4X3 112 aa15.76■□□□□ 0.11
CCDC38-203ENST00000546803 TMEM233B4DJY2 109 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 MASP2O00187 686 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 ITM2AO43736 263 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 PCDH7O60245 1069 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 MYO1DO94832 1006 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 AIFM1O95831 613 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 ALPPP05187 535 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 PRR35P0CG20 571 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 TIA1P31483 386 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC38-203ENST00000546803 BTKQ06187 659 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 Q0VFX4 171 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 BST1Q10588 318 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 LY6DQ14210 128 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 ELAVL1Q15717 326 aaKnown RBP15.75■□□□□ 0.11
CCDC38-203ENST00000546803 BTBD16Q32M84 506 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 NDUFAF5Q5TEU4 345 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 VWA5B1Q5TIE3 1220 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 ATG16L1Q676U5 607 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 OR52E8Q6IFG1 317 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 ATG14Q6ZNE5 492 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 CLNKQ7Z7G1 428 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 M1APQ8TC57 530 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 AGR3Q8TD06 166 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 SLC39A7Q92504 469 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 ANKRD9Q96BM1 317 aaPredicted RBP15.75■□□□□ 0.11
CCDC38-203ENST00000546803 TM4SF18Q96CE8 201 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 THOC3Q96J01 351 aaKnown RBP15.75■□□□□ 0.11
CCDC38-203ENST00000546803 SMAD5Q99717 465 aaKnown RBP15.75■□□□□ 0.11
CCDC38-203ENST00000546803 FAIM2Q9BWQ8 316 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 SLC25A18Q9H1K4 315 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 TUBB1Q9H4B7 451 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 ZNF446Q9NWS9 450 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 C1orf109Q9NX04 203 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 TEX10Q9NXF1 929 aaPredicted RBP15.75■□□□□ 0.11
CCDC38-203ENST00000546803 VTI1BQ9UEU0 232 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 HAO1Q9UJM8 370 aa15.75■□□□□ 0.11
CCDC38-203ENST00000546803 GNG14A0A1W2PPG7 69 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 C1orf226A1L170 272 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 SAGE2PA6NJ88 616 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 TGFBR3LH3BV60 316 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 FGF17O60258 216 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 LDB3O75112 727 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 LYPLA1O75608 230 aaPredicted RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 GPR75O95800 540 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 IFNA16P05015 189 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 LINC00032P0C843 101 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 PGDP52209 483 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 SLC26A5P58743 744 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 RAE1P78406 368 aaKnown RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 IGLV3-21P80748 117 aaPredicted RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 NR6A1Q15406 480 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 LACTB2Q53H82 288 aaPredicted RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 Q6ZSR9 355 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 HPS6Q86YV9 775 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 DDIASQ8IXT1 998 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 TMEM132CQ8N3T6 1108 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 PELOQ9BRX2 385 aaKnown RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 ZNF552Q9H707 407 aaPredicted RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 MANSC1Q9H8J5 431 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 LRTM1Q9HBL6 345 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 MMP25Q9NPA2 562 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 PNO1Q9NRX1 252 aaKnown RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 THAP1Q9NVV9 213 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 C5AR2Q9P296 337 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 WBP11Q9Y2W2 641 aaKnown RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 ZNF451Q9Y4E5 1061 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 PCDHA9Q9Y5H5 950 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 PTGDR2Q9Y5Y4 395 aa15.74■□□□□ 0.11
CCDC38-203ENST00000546803 KMT2BQ9UMN6 2715 aaPredicted RBP15.74■□□□□ 0.11
CCDC38-203ENST00000546803 ZZEF1O43149 2961 aa15.73■□□□□ 0.11
CCDC38-203ENST00000546803 PIP5K1BO14986 540 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms