RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 AZIN1O14977 448 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 RDH16O75452 317 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 LYPLA1O75608 230 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 KLHL18O94889 574 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SEMA3DO95025 777 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SNUPNO95149 360 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 NSA2O95478 260 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ETHE1O95571 254 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 TSPAN15O95858 294 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 HSD3B1P14060 373 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ALOX12P18054 663 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ITGAXP20702 1163 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ENDOUP21128 410 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF10P21506 573 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 FBLP22087 321 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 HSD3B2P26439 372 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 STAT5AP42229 794 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SSR2P43308 183 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 KIR2DL2P43627 348 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 NEK2P51955 445 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 RAP1GDS1P52306 607 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ABCE1P61221 599 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 RPS13P62277 151 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF33BQ06732 778 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 TGM3Q08188 693 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ABHD18Q0P651 414 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 CSTF3Q12996 717 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 FAM53BQ14153 422 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SLC9A5Q14940 896 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF124Q15973 351 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 FAM214AQ32MH5 1076 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ADPRMQ3LIE5 342 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 NKAIN1Q4KMZ8 207 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 DEFB134Q4QY38 66 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 TMEM35AQ53FP2 167 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ANKRD39Q53RE8 183 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SGO1Q5FBB7 561 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 MANEAQ5SRI9 462 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 KHDRBS2Q5VWX1 349 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 CLEC6AQ6EIG7 209 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 PRMT9Q6P2P2 845 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 TRIM40Q6P9F5 258 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 C6orf15Q6UXA7 325 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF517Q6ZMY9 492 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 TIPARPQ7Z3E1 657 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 PDSS2Q86YH6 399 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 CACNA2D3Q8IZS8 1091 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 DSELQ8IZU8 1212 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 KIRREL3Q8IZU9 778 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 AFAP1L2Q8N4X5 818 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ARFGAP2Q8N6H7 521 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 OR2L5Q8NG80 312 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 OR9A4Q8NGU2 314 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 METTL6Q8TCB7 284 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 LRRC8CQ8TDW0 803 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SELENOMQ8WWX9 145 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ZCCHC14Q8WYQ9 949 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 MR1Q95460 341 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 FKBP10Q96AY3 582 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 MS4A6EQ96DS6 147 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 CMTM7Q96FZ5 175 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 MAP6Q96JE9 813 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 KCNC2Q96PR1 638 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SORT1Q99523 831 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 C17orf62Q9BQA9 187 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ACPTQ9BZG2 426 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 REXO4Q9GZR2 422 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 COPS7BQ9H9Q2 264 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 BRF2Q9HAW0 419 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ANKHQ9HCJ1 492 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 FARSBQ9NSD9 589 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 CTSFQ9UBX1 484 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 FIS1Q9Y3D6 152 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 TIMM22Q9Y584 194 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 SLC22A7Q9Y694 548 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 NBEAQ8NFP9 2946 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 TLN1Q9Y490 2541 aaKnown RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 CROCCQ5TZA2 2017 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 A0A0A6YYC8 382 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 A0A0G2JN53 185 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 TMEM8BA6NDV4 472 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 NOTOA8MTQ0 251 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 H0YIG0 161 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 I3L1I5 382 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SGK494L7N484 410 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SAP18O00422 153 aaKnown RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 PLPP1O14494 284 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 KLF11O14901 512 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SHOXO15266 292 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 FOXS1O43638 330 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 TLX3O43711 291 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ITM2AO43736 263 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 GALR3O60755 368 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SNNO75324 88 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SH3BGRLO75368 114 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 ULK1O75385 1050 aa5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SKAP2O75563 359 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-211ENST00000546304 SCELO95171 688 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms