RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DMRT3Q9NQL9 472 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 ACSL6Q9UKU0 697 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 RAB23Q9ULC3 237 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 DIMT1Q9UNQ2 313 aaKnown RBP8.35□□□□□ -1.07
TDP1-204ENST00000545686 ICKQ9UPZ9 632 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 KLHL20Q9Y2M5 609 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 MAP4K5Q9Y4K4 846 aa8.35□□□□□ -1.07
TDP1-204ENST00000545686 TRBV4-1A0A0J9YWV2 114 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 A6NL46 340 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 B4DXG7 233 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 STK25O00506 426 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 FFAR1O14842 300 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 NPC1O15118 1278 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 CYP7B1O75881 506 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 SLC16A8O95907 504 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 RB1P06400 928 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 HBQ1P09105 142 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 MYL9P24844 172 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 ELAVL4P26378 380 aaKnown RBP8.34□□□□□ -1.07
TDP1-204ENST00000545686 POU1F1P28069 291 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 SLC9A3P48764 834 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 XKP51811 444 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 SMIM11AP58511 58 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 GNG2P59768 71 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 WDR5P61964 334 aaKnown RBP8.34□□□□□ -1.07
TDP1-204ENST00000545686 C2orf80Q0P641 193 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 MPEG1Q2M385 716 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 TRIM60Q495X7 471 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 KIAA1211LQ6NV74 962 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 FAM131AQ6UXB0 335 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 HTR3DQ70Z44 454 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 ARMCX6Q7L4S7 300 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 DNAJB7Q7Z6W7 309 aaPredicted RBP8.34□□□□□ -1.07
TDP1-204ENST00000545686 TMPRSS11BQ86T26 416 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 PEX5LQ8IYB4 626 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 CACTIN-AS1Q8N1I8 211 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 CRIPAKQ8N1N5 446 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 NATD1Q8N6N6 113 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 NEIL2Q969S2 332 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 CIDECQ96AQ7 238 aaPredicted RBP8.34□□□□□ -1.07
TDP1-204ENST00000545686 TRMT61AQ96FX7 289 aaKnown RBP8.34□□□□□ -1.07
TDP1-204ENST00000545686 LMLNQ96KR4 655 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 SLC6A18Q96N87 628 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 FOPNLQ96NB1 174 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 SAMD11Q96NU1 681 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 IL4I1Q96RQ9 567 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 PKP4Q99569 1192 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 ZSCAN5AQ9BUG6 496 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 FAM83DQ9H4H8 585 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 RNF121Q9H920 327 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 ISYNA1Q9NPH2 558 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 TXNL4BQ9NX01 149 aaKnown RBP8.34□□□□□ -1.07
TDP1-204ENST00000545686 PAQR5Q9NXK6 330 aaPredicted RBP8.34□□□□□ -1.07
TDP1-204ENST00000545686 DNAJC27Q9NZQ0 273 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 SCN5AQ14524 2016 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 CKAP5Q14008 2032 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 LRRK1Q38SD2 2015 aa8.34□□□□□ -1.07
TDP1-204ENST00000545686 A0A1W2PRB8 838 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 SLC5A10A0PJK1 596 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 IRGMA1A4Y4 181 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 HCN1O60741 890 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 ATG13O75143 517 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 RAB36O95755 333 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 HLA-DQB1P01920 261 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 CSF3P09919 207 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 PRKAR2AP13861 404 aaKnown RBP8.34□□□□□ -1.08
TDP1-204ENST00000545686 PRKCAP17252 672 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 AZGP1P25311 298 aaKnown RBP8.34□□□□□ -1.08
TDP1-204ENST00000545686 VIPR1P32241 457 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 SOAT1P35610 550 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 GSTM5P46439 218 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 PRLHRP49683 370 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 ZNF157P51786 506 aaPredicted RBP8.34□□□□□ -1.08
TDP1-204ENST00000545686 LIM2P55344 173 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 PUM1Q14671 1186 aaKnown RBP eCLIP8.34□□□□□ -1.08
TDP1-204ENST00000545686 HEPACAMQ14CZ8 416 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 NDUFA9Q16795 377 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 DCST1Q5T197 706 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 PDZK1Q5T2W1 519 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 BRAT1Q6PJG6 821 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 OTOP2Q7RTS6 562 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 HS6ST3Q8IZP7 471 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 FAM26EQ8N5C1 309 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 ARL14EPQ8N8R7 260 aaPredicted RBP8.34□□□□□ -1.08
TDP1-204ENST00000545686 SLC43A3Q8NBI5 491 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 ZC3HAV1LQ96H79 300 aaKnown RBP8.34□□□□□ -1.08
TDP1-204ENST00000545686 DMRTB1Q96MA1 342 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 TSSK6Q9BXA6 273 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 POLDIP3Q9BY77 421 aaKnown RBP8.34□□□□□ -1.08
TDP1-204ENST00000545686 NLNQ9BYT8 704 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 MIXL1Q9H2W2 232 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 ZDHHC6Q9H6R6 413 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 CLEC2DQ9UHP7 191 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 CD84Q9UIB8 345 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 KLHL21Q9UJP4 597 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 SLC25A13Q9UJS0 675 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 ACAD8Q9UKU7 415 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 HCN2Q9UL51 889 aa8.34□□□□□ -1.08
TDP1-204ENST00000545686 SNX11Q9Y5W9 270 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms