RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 CKAP5Q14008 2032 aa17.95■□□□□ 0.46
MSLN-202ENST00000545450 GPX5O75715 221 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 CCR7P32248 378 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 LTBRP36941 435 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SOX9P48436 509 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 HNMTP50135 292 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 MRPS15P82914 257 aaKnown RBP17.94■□□□□ 0.46
MSLN-202ENST00000545450 MED22Q15528 200 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 TEAD4Q15561 434 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SSX1Q16384 188 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 UTS2BQ765I0 119 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 RNF130Q86XS8 419 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 LGI4Q8N135 537 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 TRAM1L1Q8N609 369 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 C11orf65Q8NCR3 313 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SIMC1Q8NDZ2 872 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SUSD6Q92537 303 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 RIPOR3Q96MK2 946 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 DUSP26Q9BV47 211 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SMURF1Q9HCE7 757 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 BTNL2Q9UIR0 455 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SLC22A14Q9Y267 594 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SH3D21A4FU49 640 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 M0R129 80 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 EIF3FO00303 357 aaPredicted RBP17.94■□□□□ 0.46
MSLN-202ENST00000545450 EPHX1P07099 455 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 ATP1B2P14415 290 aaPredicted RBP17.94■□□□□ 0.46
MSLN-202ENST00000545450 JUPP14923 745 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 TP53BP2Q13625 1128 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 ITPRIPL2Q3MIP1 535 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 ZNF648Q5T619 568 aaPredicted RBP17.94■□□□□ 0.46
MSLN-202ENST00000545450 RAB43Q86YS6 212 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 RAVER1Q8IY67 606 aaKnown RBP17.94■□□□□ 0.46
MSLN-202ENST00000545450 NAGSQ8N159 534 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 OR52J3Q8NH60 311 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 TRMT61BQ9BVS5 477 aaKnown RBP17.94■□□□□ 0.46
MSLN-202ENST00000545450 DNAJC11Q9NVH1 559 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 MUTYHQ9UIF7 546 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 SLC6A14Q9UN76 642 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 V9GYH0 126 aa17.94■□□□□ 0.46
MSLN-202ENST00000545450 NDUFB5O43674 189 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 C8GP07360 202 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 TRAPPC2P0DI81 140 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 TRAPPC2BP0DI82 140 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 ITGA2P17301 1181 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 TNFRSF1BP20333 461 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 HNF4AP41235 474 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 RACK1P63244 317 aaKnown RBP17.93■□□□□ 0.46
MSLN-202ENST00000545450 SPIBQ01892 262 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 ZNF33BQ06732 778 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 DOC2BQ14184 412 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 EXOC3L2Q2M3D2 409 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 ASB11Q8WXH4 323 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 C11orf24Q96F05 449 aaPredicted RBP17.93■□□□□ 0.46
MSLN-202ENST00000545450 MAGEB10Q96LZ2 347 aaPredicted RBP17.93■□□□□ 0.46
MSLN-202ENST00000545450 ZSCAN5AQ9BUG6 496 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 PRSS16Q9NQE7 514 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 VPS29Q9UBQ0 182 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 PRUNE2Q8WUY3 3088 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 NUP214P35658 2090 aaPredicted RBP17.93■□□□□ 0.46
MSLN-202ENST00000545450 SCAMP2O15127 329 aaKnown RBP17.93■□□□□ 0.46
MSLN-202ENST00000545450 SGTAO43765 313 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 PCDH7O60245 1069 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 HIST1H2AGP0C0S8 130 aaPredicted RBP17.93■□□□□ 0.46
MSLN-202ENST00000545450 OR56A5P0C7T3 313 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 ADRB3P13945 408 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 HIST1H2ADP20671 130 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 CHMP24386 653 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 CDH12P55289 794 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.93■□□□□ 0.46
MSLN-202ENST00000545450 CHIT1Q13231 466 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 GAB1Q13480 694 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 IFI44LQ53G44 452 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 NLRP8Q86W28 1048 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 PSD4Q8NDX1 1056 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 HIST1H2AHQ96KK5 128 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 COQ10AQ96MF6 247 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 DEPDC7Q96QD5 511 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 PHOX2BQ99453 314 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 HIST1H2AJQ99878 128 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 H2AFJQ9BTM1 129 aa17.93■□□□□ 0.46
MSLN-202ENST00000545450 RUVBL1Q9Y265 456 aaKnown RBP17.93■□□□□ 0.46
MSLN-202ENST00000545450 HMX3A6NHT5 357 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 GABRR3A8MPY1 467 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 ITPKAP23677 461 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 ZNF284Q2VY69 593 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 ARMC4Q5T2S8 1044 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 PLAG1Q6DJT9 500 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 KRT73Q86Y46 540 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 GALNT12Q8IXK2 581 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 ASB15Q8WXK1 588 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 AP2M1Q96CW1 435 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 MSLNLQ96KJ4 702 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 BARHL1Q9BZE3 327 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 ROGDIQ9GZN7 287 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 ZNF556Q9HAH1 456 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 THSD1Q9NS62 852 aa17.92■□□□□ 0.46
MSLN-202ENST00000545450 SPATA6Q9NWH7 488 aaPredicted RBP17.92■□□□□ 0.46
MSLN-202ENST00000545450 PRAMEF25A6NGN4 478 aa17.91■□□□□ 0.46
MSLN-202ENST00000545450 APODP05090 189 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms