RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 KIAA1191Q96A73 305 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 WBP1Q96G27 269 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 SHDQ96IW2 340 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 KLHL15Q96M94 604 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 LGMNQ99538 433 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 KCNJ15Q99712 375 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 CEP41Q9BYV8 373 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 TUBB1Q9H4B7 451 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 GAREM1Q9H706 876 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 HEXA-AS1Q9H8Q6 139 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 FBRSL1Q9HCM7 1045 aaKnown RBP5.04□□□□□ -1.6
USP28-213ENST00000544967 ACSS2Q9NR19 701 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 GPATCH2LQ9NWQ4 482 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 TSPAN16Q9UKR8 245 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 VPS9D1Q9Y2B5 631 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 CEP290O15078 2479 aa5.04□□□□□ -1.6
USP28-213ENST00000544967 E5RI56 91 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 I3L521 148 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 MEN1O00255 615 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 GSTA4O15217 222 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 KIAA0513O60268 411 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 SCG5P05408 212 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 RHOP08100 348 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CSF3P09919 207 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 GABRB1P18505 474 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 SLC1A2P43004 574 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 DAPP51397 102 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 KCNQ1P51787 676 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 EPHB3P54753 998 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 TWF1Q12792 350 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 NKG7Q16617 165 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 GAB4Q2WGN9 574 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CD276Q5ZPR3 534 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 SAXO2Q658L1 398 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 JMJD6Q6NYC1 403 aaPredicted RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 MTSS1LQ765P7 747 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 KRT74Q7RTS7 529 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 GPRIN1Q7Z2K8 1008 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 ENTHD1Q8IYW4 607 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 ZNF683Q8IZ20 524 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CYP4Z2PQ8N1L4 340 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 UBE2J2Q8N2K1 259 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CPXM2Q8N436 756 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CAMKVQ8NCB2 501 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 PROKR1Q8TCW9 393 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 PTERQ96BW5 349 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 LMLNQ96KR4 655 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 BBS4Q96RK4 519 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 FAM129BQ96TA1 746 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 P2RY13Q9BPV8 354 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 KLF16Q9BXK1 252 aaPredicted RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 C11orf54Q9H0W9 315 aaPredicted RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 SDHAF3Q9NRP4 125 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 IMP3Q9NV31 184 aaKnown RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 AKAP7Q9P0M2 348 aaPredicted RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 EPHA6Q9UF33 1036 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 SLC23A1Q9UHI7 598 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 RPS6KA6Q9UK32 745 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 NEU3Q9UQ49 428 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 LIPT1Q9Y234 373 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CACNG2Q9Y698 323 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 EYSQ5T1H1 3165 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 TRIOBPQ9H2D6 2365 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 PRSS44E7EML9 344 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 NOBOXO60393 691 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 KERAO60938 352 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CREG1O75629 220 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 IL6P05231 212 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 LAMP2P13473 410 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CD1DP15813 335 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 GOT1P17174 413 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CTPS1P17812 591 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 KIR2DL3P43628 341 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CLCNKAP51800 687 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 DAOAP59103 153 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 DCDC1P59894 354 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 RAB14P61106 215 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 PPP3R1P63098 170 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 ABHD18Q0P651 414 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 NPRL3Q12980 569 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 DGCR6Q14129 220 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 TATDN3Q17R31 274 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CERCAMQ5T4B2 595 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 C11orf88Q6PI97 169 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 CES3Q6UWW8 571 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 FAM92BQ6ZTR7 304 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 GPR151Q8TDV0 419 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 OTUB2Q96DC9 234 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 SGTBQ96EQ0 304 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 ATXN7L3BQ96GX2 97 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 ZNF382Q96SR6 550 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 TBL1YQ9BQ87 522 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 TBCDQ9BTW9 1192 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 HDHD5Q9BXW7 423 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 MFSD1Q9H3U5 465 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 C8orf33Q9H7E9 229 aaPredicted RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 MVB12BQ9H7P6 319 aa5.03□□□□□ -1.6
USP28-213ENST00000544967 TRIM45Q9H8W5 580 aaPredicted RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 CARS2Q9HA77 564 aaKnown RBP5.03□□□□□ -1.6
USP28-213ENST00000544967 CERS4Q9HA82 394 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms