RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 H3F3CQ6NXT2 135 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 CYP20A1Q6UW02 462 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 IGFL3Q6UXB1 125 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 HDXQ7Z353 690 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 NUDCD3Q8IVD9 361 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 HOMEZQ8IX15 550 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 ZNF843Q8N446 348 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 C1orf52Q8N6N3 182 aaKnown RBP17.91■□□□□ 0.46
DDX55-211ENST00000544429 TANKQ92844 425 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 ARL8AQ96BM9 186 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 LPAR4Q99677 370 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 TUBB1Q9H4B7 451 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 RPF2Q9H7B2 306 aaKnown RBP17.91■□□□□ 0.46
DDX55-211ENST00000544429 MMP25Q9NPA2 562 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 TEX10Q9NXF1 929 aaPredicted RBP17.91■□□□□ 0.46
DDX55-211ENST00000544429 C5AR2Q9P296 337 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 VTI1BQ9UEU0 232 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 DNAJC15Q9Y5T4 150 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 SPENQ96T58 3664 aaKnown RBP17.9■□□□□ 0.46
DDX55-211ENST00000544429 SAGE2PA6NJ88 616 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 KLHL41O60662 606 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 AIFM1O95831 613 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 PRB1P04280 392 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 ITGA3P26006 1051 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 SOX11P35716 441 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 GPR143P51810 404 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 PGDP52209 483 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 SLC26A5P58743 744 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 SLC13A2Q13183 592 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 EXT1Q16394 746 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 JMJD6Q6NYC1 403 aaPredicted RBP17.9■□□□□ 0.46
DDX55-211ENST00000544429 SCIMPQ6UWF3 145 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 HPS6Q86YV9 775 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 EFCAB3Q8N7B9 438 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 M1APQ8TC57 530 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 SREK1Q8WXA9 508 aaKnown RBP17.9■□□□□ 0.46
DDX55-211ENST00000544429 APIPQ96GX9 242 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 THOC3Q96J01 351 aaKnown RBP17.9■□□□□ 0.46
DDX55-211ENST00000544429 EML4Q9HC35 981 aaKnown RBP17.9■□□□□ 0.46
DDX55-211ENST00000544429 PRM3Q9NNZ6 103 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 KCNK9Q9NPC2 374 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 ZNF71Q9NQZ8 489 aaPredicted RBP17.9■□□□□ 0.46
DDX55-211ENST00000544429 ZNF451Q9Y4E5 1061 aa17.9■□□□□ 0.46
DDX55-211ENST00000544429 FGF17O60258 216 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 LDB3O75112 727 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 PRKRAO75569 313 aaKnown RBP17.89■□□□□ 0.45
DDX55-211ENST00000544429 SERPINE1P05121 402 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 NR2F6P10588 404 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 ITGAMP11215 1152 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 PPP2R1BP30154 601 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 BUD31P41223 144 aaPredicted RBP17.89■□□□□ 0.45
DDX55-211ENST00000544429 TRA2BP62995 288 aaKnown RBP17.89■□□□□ 0.45
DDX55-211ENST00000544429 AP2B1P63010 937 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 RAPSNQ13702 412 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 SERTAD2Q14140 314 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 KIAA0040Q15053 153 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 SPIN4Q56A73 249 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 CCNYL2Q5T2Q4 361 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 ASB18Q6ZVZ8 466 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 CLNKQ7Z7G1 428 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 C7orf57Q8NEG2 295 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 DNAJB14Q8TBM8 379 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 ELP5Q8TE02 316 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 UCN3Q969E3 161 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 TM4SF18Q96CE8 201 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 METTL2AQ96IZ6 378 aaKnown RBP17.89■□□□□ 0.45
DDX55-211ENST00000544429 ADAP2Q9NPF8 381 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 MCM8Q9UJA3 840 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 HAO1Q9UJM8 370 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 TRAF6Q9Y4K3 522 aa17.89■□□□□ 0.45
DDX55-211ENST00000544429 TMEM233B4DJY2 109 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 ITM2AO43736 263 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 RSL1D1O76021 490 aaKnown RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 TLX1P31314 330 aaPredicted RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 MAPK12P53778 367 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 FOLH1Q04609 750 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 ACTN3Q08043 901 aaPredicted RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 ELAVL1Q15717 326 aaKnown RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 CHI3L2Q15782 390 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 BTBD16Q32M84 506 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 NDUFAF5Q5TEU4 345 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 Q6ZSR9 355 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 CLYBLQ8N0X4 340 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 ARMC10Q8N2F6 343 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 APCDD1LQ8NCL9 501 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 BRIX1Q8TDN6 353 aaKnown RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 PTPMT1Q8WUK0 201 aaPredicted RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 ATP6V1G3Q96LB4 118 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 ALOXE3Q9BYJ1 711 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 C20orf27Q9GZN8 174 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 ZBTB20Q9HC78 741 aaPredicted RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 CES1P1Q9UKY3 287 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 G3BP2Q9UN86 482 aaKnown RBP17.88■□□□□ 0.45
DDX55-211ENST00000544429 PTGDR2Q9Y5Y4 395 aa17.88■□□□□ 0.45
DDX55-211ENST00000544429 WDR91A4D1P6 747 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 WASHC1A8K0Z3 465 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 TMEM114B3SHH9 223 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 PGRMC2O15173 223 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 CRCPO75575 148 aa17.87■□□□□ 0.45
DDX55-211ENST00000544429 SASH3O75995 380 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms