RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 INPP5JQ15735 1006 aaPredicted RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 EXT1Q16394 746 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 TNFAIP8L3Q5GJ75 292 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 ACER2Q5QJU3 275 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 CES4AQ5XG92 561 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 C16orf47Q6ZP98 133 aaPredicted RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 HPS6Q86YV9 775 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 MMP21Q8N119 569 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 CNPY4Q8N129 248 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 METTL4Q8N3J2 472 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 RIBC1Q8N443 379 aaPredicted RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 CISD2Q8N5K1 135 aaKnown RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 METTL6Q8TCB7 284 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 TCP10LQ8TDR4 215 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 CHTF18Q8WVB6 975 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 SELENOMQ8WWX9 145 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 MIB2Q96AX9 1013 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 PPWD1Q96BP3 646 aaKnown RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 SNRNP40Q96DI7 357 aaKnown RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 APOPT1Q96IL0 206 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 ZIM3Q96PE6 472 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 FAM111AQ96PZ2 611 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 SERPINI1Q99574 410 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 MECRQ9BV79 373 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 GATA5Q9BWX5 397 aaPredicted RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 ACPTQ9BZG2 426 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 CDCP1Q9H5V8 836 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 RPF2Q9H7B2 306 aaKnown RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 KCNK13Q9HB14 408 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 MID1IP1Q9NPA3 183 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 MKS1Q9NXB0 559 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 TEX10Q9NXF1 929 aaPredicted RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 ANKRD10Q9NXR5 420 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 PPIEQ9UNP9 301 aaKnown RBP9.09□□□□□ -0.95
YBX3-212ENST00000542002 SLC12A4Q9UP95 1085 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 PCDHGA10Q9Y5H3 936 aa9.09□□□□□ -0.95
YBX3-212ENST00000542002 KLHL41O60662 606 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 ULK1O75385 1050 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 WISP2O76076 250 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 SEMA3DO95025 777 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 ZIC2O95409 532 aaPredicted RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 ESRRBO95718 433 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 AIFM1O95831 613 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 DDAH2O95865 285 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 ARRB2P32121 409 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 CD96P40200 585 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 ETV4P43268 484 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 TNFSF10P50591 281 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 PKNOX1P55347 436 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 RAE1P78406 368 aaKnown RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 PHEXP78562 749 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 IGLV3-21P80748 117 aaPredicted RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 HMGCS1Q01581 520 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 TNFRSF17Q02223 184 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 FOLH1Q04609 750 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 SRSF11Q05519 484 aaKnown RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 STX4Q12846 297 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 ZNF750Q32MQ0 723 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 BEND6Q5SZJ8 279 aaPredicted RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 IRAK1BP1Q5VVH5 260 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 LIPMQ5VYY2 423 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 FRMD7Q6ZUT3 714 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 COMMD6Q7Z4G1 85 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 EXOC3L1Q86VI1 746 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 ZNF227Q86WZ6 799 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 BEST3Q8N1M1 668 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 CCDC63Q8NA47 563 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 B3GNT7Q8NFL0 401 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 OR1N1Q8NGS0 311 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 RDH11Q8TC12 318 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 CPT1CQ8TCG5 803 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 ADAMTS18Q8TE60 1221 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 SREK1Q8WXA9 508 aaKnown RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 TM4SF18Q96CE8 201 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 CCDC126Q96EE4 140 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 C11orf24Q96F05 449 aaPredicted RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 APIPQ96GX9 242 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 CNDP1Q96KN2 507 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 BARD1Q99728 777 aaKnown RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 LIN28AQ9H9Z2 209 aaKnown RBP9.08□□□□□ -0.96
YBX3-212ENST00000542002 BRF2Q9HAW0 419 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 SLAMF7Q9NQ25 335 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 CES1P1Q9UKY3 287 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 SNX6Q9UNH7 406 aa9.08□□□□□ -0.96
YBX3-212ENST00000542002 SERTM1A2A2V5 107 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 WISP1O95388 367 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 GPR75O95800 540 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 IFNA16P05015 189 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 SOX18P35713 384 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 MLF1P58340 268 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ARG2P78540 354 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 TUBA3CQ13748 450 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ZNF169Q14929 603 aaPredicted RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 TERF2Q15554 542 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 ELAVL1Q15717 326 aaKnown RBP9.07□□□□□ -0.96
YBX3-212ENST00000542002 KRT71Q3SY84 523 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 CEP85LQ5SZL2 805 aa9.07□□□□□ -0.96
YBX3-212ENST00000542002 CCNYL2Q5T2Q4 361 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms