RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	RGMA	Q96B86	450 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	REPS1	Q96D71	796 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	C5orf34	Q96MH7	638 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	NTMT1	Q9BV86	223 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	ALOXE3	Q9BYJ1	711 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	L2HGDH	Q9H9P8	463 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	SEMA4B	Q9NPR2	832 aa	Predicted RBP	12.7	□□□□□ -0.38
POLE-215	ENST00000540987	LRFN1	Q9P244	771 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	ATG4B	Q9Y4P1	393 aa		12.7	□□□□□ -0.38
POLE-215	ENST00000540987	CRYAB	P02511	175 aa	Known RBP	12.69	□□□□□ -0.38
POLE-215	ENST00000540987	SP1	P08047	785 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	STS	P08842	583 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	CD46	P15529	392 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	TSPAN8	P19075	237 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	ARL1	P40616	181 aa	Predicted RBP	12.69	□□□□□ -0.38
POLE-215	ENST00000540987	HLCS	P50747	726 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	PHEX	P78562	749 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	STX4	Q12846	297 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	CUL3	Q13618	768 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	GGTA1P	Q4G0N0	100 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	C4orf17	Q53FE4	359 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	TEX35	Q5T0J7	233 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	SLC25A25	Q6KCM7	469 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	LETMD1	Q6P1Q0	360 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	DGAT2L6	Q6ZPD8	337 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	OR4N5	Q8IXE1	308 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	TMEM132C	Q8N3T6	1108 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	OR4F6	Q8NGB9	312 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	OR14A16	Q8NHC5	309 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	DNAJB8	Q8NHS0	232 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	SLC2A12	Q8TD20	617 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	MTBP	Q96DY7	904 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	C1QTNF3	Q9BXJ4	246 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.69	□□□□□ -0.38
POLE-215	ENST00000540987	DDX31	Q9H8H2	851 aa	Known RBP	12.69	□□□□□ -0.38
POLE-215	ENST00000540987	LIN28A	Q9H9Z2	209 aa	Known RBP	12.69	□□□□□ -0.38
POLE-215	ENST00000540987	TMEM216	Q9P0N5	145 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.69	□□□□□ -0.38
POLE-215	ENST00000540987	VTI1B	Q9UEU0	232 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	PLEKHB1	Q9UF11	243 aa	Predicted RBP	12.69	□□□□□ -0.38
POLE-215	ENST00000540987	ZNF225	Q9UK10	706 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	PPT2	Q9UMR5	302 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	ASB4	Q9Y574	426 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	SPACA6	W5XKT8	324 aa		12.69	□□□□□ -0.38
POLE-215	ENST00000540987	SYNDIG1L	A6NDD5	238 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	WASHC1	A8K0Z3	465 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	FOXO6	A8MYZ6	492 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	C17orf105	B2RV13	164 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	FOXE1	O00358	373 aa	Predicted RBP	12.68	□□□□□ -0.38
POLE-215	ENST00000540987	FCHO1	O14526	889 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	LRRTM2	O43300	516 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	ITGA10	O75578	1167 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	SEMA3D	O95025	777 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	UNC5C	O95185	931 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	AIFM1	O95831	613 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	CLDN1	O95832	211 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	GBA	P04062	536 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	SHBG	P04278	402 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	PTX3	P26022	381 aa	Predicted RBP	12.68	□□□□□ -0.38
POLE-215	ENST00000540987	CYB561	P49447	251 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	ARFIP1	P53367	373 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	CDH13	P55290	713 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	SERTAD2	Q14140	314 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	RNFT1	Q5M7Z0	435 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	C1QL3	Q5VWW1	255 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	FRG2	Q64ET8	278 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	GFRAL	Q6UXV0	394 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	12.68	□□□□□ -0.38
POLE-215	ENST00000540987	GPR180	Q86V85	440 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	SIAH3	Q8IW03	269 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	TMEM178A	Q8NBL3	297 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	MORN4	Q8NDC4	146 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	UCN3	Q969E3	161 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	ATP6V1E2	Q96A05	226 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	MTFMT	Q96DP5	389 aa	Known RBP	12.68	□□□□□ -0.38
POLE-215	ENST00000540987	TMEM237	Q96Q45	408 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	FRG2B	Q96QU4	278 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	CENPK	Q9BS16	269 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	OR8D2	Q9GZM6	311 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	RPF2	Q9H7B2	306 aa	Known RBP	12.68	□□□□□ -0.38
POLE-215	ENST00000540987	FARSB	Q9NSD9	589 aa	Known RBP	12.68	□□□□□ -0.38
POLE-215	ENST00000540987	LYAR	Q9NX58	379 aa	Known RBP	12.68	□□□□□ -0.38
POLE-215	ENST00000540987	FETUB	Q9UGM5	382 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	PHF11	Q9UIL8	331 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987	CLCA3P	Q9Y6N3	262 aa		12.68	□□□□□ -0.38
POLE-215	ENST00000540987		A0A1W2PR48	441 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987		A0A1W2PS29	197 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	GOLGA8R	I6L899	631 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	HRK	O00198	91 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	CDK2AP1	O14519	115 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	PROM1	O43490	865 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	DLX3	O60479	287 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	ZFAND5	O76080	213 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	FAM58BP	P0C7Q3	252 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	NR2F6	P10588	404 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	STT3A	P46977	705 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	HK2	P52789	917 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	FOLH1	Q04609	750 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	MAPKAPK3	Q16644	382 aa		12.67	□□□□□ -0.38
POLE-215	ENST00000540987	UNC50	Q53HI1	259 aa		12.67	□□□□□ -0.38

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