RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 EIF2DP41214 584 aaKnown RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 RGS6P49758 472 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 KCNC3Q14003 757 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 RBM12BQ8IXT5 1001 aaKnown RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 OR4D11Q8NGI4 311 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 IPCEF1Q8WWN9 437 aaPredicted RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 MGLLQ99685 303 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 PIP5K1AQ99755 562 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 GABARAPL3Q9BY60 117 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 EHD1Q9H4M9 534 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 EQTNQ9NQ60 294 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 PAK6Q9NQU5 681 aaPredicted RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 POFUT2Q9Y2G5 429 aa13.01□□□□□ -0.33
BNIP3-202ENST00000540159 MRPS23Q9Y3D9 190 aaKnown RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 SNRNP200O75643 2136 aaKnown RBP13.01□□□□□ -0.33
BNIP3-202ENST00000540159 B4GALT2O60909 372 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 RECKO95980 971 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 S100A5P33763 92 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 ARHGAP15Q53QZ3 475 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 FAM71E1Q6IPT2 247 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 DGLUCYQ7Z3D6 616 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 COMTD1Q86VU5 262 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 PARP16Q8N5Y8 322 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 CELF2-AS1Q8N7Q2 184 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 TCEANCQ8N8B7 351 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 TFGQ92734 400 aaPredicted RBP13□□□□□ -0.33
BNIP3-202ENST00000540159 TIFAQ96CG3 184 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 BHLHE41Q9C0J9 482 aaPredicted RBP13□□□□□ -0.33
BNIP3-202ENST00000540159 IL20RAQ9UHF4 553 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 HSPE1-MOB4S4R3N1 261 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 ANHXE9PGG2 379 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 OR1F1O43749 312 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 CNOT3O75175 753 aaKnown RBP13□□□□□ -0.33
BNIP3-202ENST00000540159 OR12D1P0DN82 309 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 PTPN2P17706 415 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 GPC1P35052 558 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 NR4A2P43354 598 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
BNIP3-202ENST00000540159 HOXC5Q00444 222 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 TARDBPQ13148 414 aaKnown RBP eCLIP13□□□□□ -0.33
BNIP3-202ENST00000540159 ZMAT1Q5H9K5 638 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 UBE2UQ5VVX9 321 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 NEK10Q6ZWH5 1172 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 SLC46A3Q7Z3Q1 461 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 OR8H2Q8N162 312 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 OR4C15Q8NGM1 316 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 GEMIN6Q8WXD5 167 aaKnown RBP13□□□□□ -0.33
BNIP3-202ENST00000540159 ABHD8Q96I13 439 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 C17orf62Q9BQA9 187 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 MVB12BQ9H7P6 319 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 TVP23BQ9NYZ1 205 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 B3GNT3Q9Y2A9 372 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 HCN4Q9Y3Q4 1203 aa13□□□□□ -0.33
BNIP3-202ENST00000540159 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 METTL15A6NJ78 407 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PSMD11O00231 422 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 SLC28A2O43868 658 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ADH5P11766 374 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ANXA8P13928 327 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 MYOGP15173 224 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PPM1AP35813 382 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PPP5CP53041 499 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 CDC42P60953 191 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 MLLT1Q03111 559 aaPredicted RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 TAB1Q15750 504 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ZNF77Q15935 545 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 DESI1Q6ICB0 168 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.99□□□□□ -0.333e-22■□□□□ 9.1
BNIP3-202ENST00000540159 TRMT61BQ9BVS5 477 aaKnown RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 NUAK2Q9H093 628 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 FBXO8Q9NRD0 319 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 SEMA3GQ9NS98 782 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 CORO2BQ9UQ03 480 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ANGPT4Q9Y264 503 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 CARD8Q9Y2G2 431 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 GPR52Q9Y2T5 361 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 LRRK1Q38SD2 2015 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 A6NL46 340 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 NPIPB8E9PQR5 432 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PCDH8O95206 1070 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 TBX6O95947 436 aaPredicted RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PPIBP23284 216 aaKnown RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 TTC23LQ6PF05 361 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 NCCRP1Q6ZVX7 275 aaPredicted RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 PGBD3Q8N328 593 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 OXR1Q8N573 874 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 GPR32P1Q8NGA4 272 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 STARD8Q92502 1023 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 ARMC5Q96C12 935 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 SIGLEC11Q96RL6 698 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 SMAD5Q99717 465 aaKnown RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 EFCAB11Q9BUY7 163 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 SNTG1Q9NSN8 517 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 EHD3Q9NZN3 535 aa12.99□□□□□ -0.33
BNIP3-202ENST00000540159 YARS2Q9Y2Z4 477 aaKnown RBP12.99□□□□□ -0.33
BNIP3-202ENST00000540159 DNMT3AQ9Y6K1 912 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms