RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ERVK-11Q9UQG0 969 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 CLDN25C9JDP6 229 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 PLPP1O14494 284 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 SERPIND1P05546 499 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 JUNDP17535 347 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 EFNA1P20827 205 aaPredicted RBP16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 AGXTP21549 392 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 CD38P28907 300 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 CXCL12P48061 93 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 C21orf58P58505 322 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 MC1RQ01726 317 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 ZNF763Q0D2J5 394 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 ZNF846Q147U1 533 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 ANKRD34AQ69YU3 496 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 LAIR2Q6ISS4 152 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 NAGSQ8N159 534 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 PARP8Q8N3A8 854 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 SVOPLQ8N434 492 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 CADM4Q8NFZ8 388 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 SLC47A1Q96FL8 570 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 ITCHQ96J02 903 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 RBM4BQ9BQ04 359 aaKnown RBP16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 MACROD1Q9BQ69 325 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 RBM4Q9BWF3 364 aaKnown RBP16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 PITHD1Q9GZP4 211 aaPredicted RBP16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 RMND5AQ9H871 391 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 CPNE7Q9UBL6 633 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 MAN2B2Q9Y2E5 1009 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 SNX5Q9Y5X3 404 aa16.25■□□□□ 0.19
PCDHB17P-201ENST00000539533 TRBV5-3A0A0A0MS03 114 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 A0A1W2PR77 199 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 K7ESF4 209 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 HAT1O14929 419 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 VIPP01282 170 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 PTPN6P29350 595 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 BCL6P41182 706 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 ABATP80404 500 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 OCA2Q04671 838 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 DMWDQ09019 674 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 TOP3AQ13472 1001 aaPredicted RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 SPESP1Q6UW49 350 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 PIWIL3Q7Z3Z3 882 aaKnown RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 BTLAQ7Z6A9 289 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 ZNF548Q8NEK5 533 aaPredicted RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 OR8J2Q8NGG1 315 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 C16orf78Q8WTQ4 265 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 STARD8Q92502 1023 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 HSPA12BQ96MM6 686 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 THUMPD3Q9BV44 507 aaKnown RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 LRRC61Q9BV99 259 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 ZNF717Q9BY31 904 aaPredicted RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 SYNPO2LQ9H987 977 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 TMEM184CQ9NVA4 438 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 APOBEC3BQ9UH17 382 aaKnown RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 UTS2RQ9UKP6 389 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 NUP214P35658 2090 aaPredicted RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 GNGT2O14610 69 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 ITIH1P19827 911 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 BCKDHBP21953 392 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 CMPK1P30085 196 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 GP2P55259 537 aaKnown RBP16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 TAS2R50P59544 299 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 OXA1LQ15070 435 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 RUNDC3AQ59EK9 446 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 LRIF1Q5T3J3 769 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 CPTPQ5TA50 214 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 FKBP9P1Q75LS8 142 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 ANKRD13BQ86YJ7 626 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 TMEFF1Q8IYR6 380 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 CLECL1Q8IZS7 167 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 OR10A6Q8NH74 314 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 SLC37A2Q8TED4 501 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 CREB3L4Q8TEY5 395 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 ALPK1Q96QP1 1244 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 NODALQ96S42 347 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 DUSP26Q9BV47 211 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 SH3BP4Q9P0V3 963 aa16.24■□□□□ 0.19
PCDHB17P-201ENST00000539533 A0A096LPI6 279 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 TRBC2A0A5B9 178 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 SLC1A7O00341 560 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 RFXANKO14593 260 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 PPM1DO15297 605 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 ERN1O75460 977 aaKnown RBP16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 DNAJB5O75953 348 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 INMTO95050 263 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 C1QCP02747 245 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 GRK3P35626 688 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 BLKP51451 505 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 RAD23AP54725 363 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 CTF1Q16619 201 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 TMEM132CQ8N3T6 1108 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 FAM46DQ8NEK8 389 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 OR10G6Q8NH81 332 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 FAM174AQ8TBP5 190 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 AICDAQ9GZX7 198 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 HMG20AQ9NP66 347 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 SACM1LQ9NTJ5 587 aa16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 PAK1IP1Q9NWT1 392 aaPredicted RBP16.23■□□□□ 0.19
PCDHB17P-201ENST00000539533 RBMX2Q9Y388 322 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms