RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF354AO60765 605 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 LDB3O75112 727 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 GLSO94925 669 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 CAPN3P20807 821 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 HIST1H1TP22492 207 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 ATP5A1P25705 553 aaKnown RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 CHRNB4P30926 498 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 GMPRP36959 345 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 CASP2P42575 452 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 RNF4P78317 190 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 PLGLB1Q02325 96 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 TFF3Q07654 80 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 CALCOCO2Q13137 446 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 HIST2H2ACQ16777 129 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 ZNF750Q32MQ0 723 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 TMEM35AQ53FP2 167 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 HIST2H2AA3Q6FI13 130 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 PAOXQ6QHF9 649 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 RGS9BPQ6ZS82 235 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 GK5Q6ZS86 529 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 CYS1Q717R9 158 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 ACOT4Q8N9L9 421 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 GOLM1Q8NBJ4 401 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 SRFBP1Q8NEF9 429 aaKnown RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 LILRB4Q8NHJ6 448 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 SCYL1Q96KG9 808 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 TBCDQ9BTW9 1192 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 MCCC2Q9HCC0 563 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 NPDC1Q9NQX5 325 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 GRHL1Q9NZI5 618 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 NUDT4Q9NZJ9 180 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 WHRNQ9P202 907 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 RNF14Q9UBS8 474 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 LIPGQ9Y5X9 500 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 NIPBLQ6KC79 2804 aaeCLIP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 NKX2-6A6NCS4 301 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 FAM187AA6NFU0 413 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 FAM90A27PA6NNH2 459 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 FGF17O60258 216 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 ETHE1O95571 254 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 IGHG3P01860 377 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 SLC35E2BP0CK96 405 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 TNNI3P19429 210 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 SERPINB1P30740 379 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 SSR2P43308 183 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 GPX6P59796 221 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 IGLV3-21P80748 117 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-206ENST00000538970 ID2Q02363 134 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 PCDH1Q08174 1060 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 DLG1Q12959 904 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 NDUFAF5Q5TEU4 345 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 MED27Q6P2C8 311 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 CMC1Q7Z7K0 106 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 CDH24Q86UP0 819 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 SLC22A16Q86VW1 577 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 LAS2Q8IYD9 372 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 FAM109AQ8N4B1 249 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 OR5L2Q8NGL0 311 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 STAG3L4Q8TBR4 150 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 ZNF721Q8TF20 911 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 UBTD2Q8WUN7 234 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 RND1Q92730 232 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 UBE2E3Q969T4 207 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 ANKRD9Q96BM1 317 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-206ENST00000538970 SGCZQ96LD1 299 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 ATOH8Q96SQ7 321 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 FAM173AQ9BQD7 235 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 ERP44Q9BS26 406 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 PHACTR1Q9C0D0 580 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 ALG9Q9H6U8 611 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 IL1RL2Q9HB29 575 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 PNPLA3Q9NST1 481 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 COPS7AQ9UBW8 275 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 SPACA6W5XKT8 324 aa11.58□□□□□ -0.56
VAMP1-206ENST00000538970 OR14I1A6ND48 311 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 NPIPA2E9PIF3 369 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 NPIPA3F8WFD2 350 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 K7EPI3 171 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 SAP18O00422 153 aaKnown RBP11.57□□□□□ -0.56
VAMP1-206ENST00000538970 RAD51CO43502 376 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 KERAO60938 352 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 SH3BGRLO75368 114 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 FAM155BO75949 473 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 TOXO94900 526 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 TGFB1P01137 390 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 GSTA2P09210 222 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 CCL3P10147 92 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 PCNAP12004 261 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 CNR1P21554 472 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 CPN2P22792 545 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 MSX1P28360 303 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 SPRP35270 261 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-206ENST00000538970 MAGEA5P43359 124 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 STT3AP46977 705 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 DNASE1L1P49184 302 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 NUP107P57740 925 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 SLMAPQ14BN4 828 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 MPEG1Q2M385 716 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 HYAL4Q2M3T9 481 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 AP5B1Q2VPB7 878 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms