RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 DNAJC13O75165 2243 aa12.81□□□□□ -0.36
CD9-208ENST00000538834 CLEC18AA5D8T8 446 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 FGF17O60258 216 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 MAN1A2O60476 641 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 FAM58BPP0C7Q3 252 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 GALNSP34059 522 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 HTR6P50406 440 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 TNFSF10P50591 281 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 FOXA1P55317 472 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CSTF3Q12996 717 aaKnown RBP12.8□□□□□ -0.36
CD9-208ENST00000538834 SERTAD2Q14140 314 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 ELAVL1Q15717 326 aaKnown RBP12.8□□□□□ -0.36
CD9-208ENST00000538834 COLEC12Q5KU26 742 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 TCHHL1Q5QJ38 904 aaPredicted RBP12.8□□□□□ -0.36
CD9-208ENST00000538834 ACER2Q5QJU3 275 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 LIPMQ5VYY2 423 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 GALNT18Q6P9A2 607 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CLEC18BQ6UXF7 455 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 TRIM46Q7Z4K8 759 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 NUDT13Q86X67 352 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CRLF3Q8IUI8 442 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 C10orf107Q8IVU9 208 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CDYL2Q8N8U2 506 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CLEC18CQ8NCF0 446 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CENPKQ9BS16 269 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 GATA5Q9BWX5 397 aaPredicted RBP12.8□□□□□ -0.36
CD9-208ENST00000538834 MRPL1Q9BYD6 325 aaKnown RBP12.8□□□□□ -0.36
CD9-208ENST00000538834 ALOXE3Q9BYJ1 711 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 EPS8L2Q9H6S3 715 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 SSU72Q9NP77 194 aaKnown RBP12.8□□□□□ -0.36
CD9-208ENST00000538834 PTGFRNQ9P2B2 879 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 SLC17A7Q9P2U7 560 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CES1P1Q9UKY3 287 aa12.8□□□□□ -0.36
CD9-208ENST00000538834 CCDC151A5D8V7 595 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 WASHC1A8K0Z3 465 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 TRIM13O60858 407 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 LDB3O75112 727 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 DDAH2O95865 285 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 WDPCPO95876 746 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 KRT6AP02538 564 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 KRT6BP04259 564 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 IGKV3-11P04433 115 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 DHRS4L1P0CG22 281 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 CHN1P15882 459 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 CPN2P22792 545 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 SOX18P35713 384 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 KRT6CP48668 564 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 MLLT10P55197 1068 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 RAE1P78406 368 aaKnown RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 ACTN3Q08043 901 aaPredicted RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 BEND6Q5SZJ8 279 aaPredicted RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 IRAK1BP1Q5VVH5 260 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 ZNF324BQ6AW86 544 aaPredicted RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 PRICKLE2Q7Z3G6 844 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 COMMD6Q7Z4G1 85 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 EXOC3L1Q86VI1 746 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 ZNF227Q86WZ6 799 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 SRRM1Q8IYB3 904 aaKnown RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 KIF2BQ8N4N8 673 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 GBP7Q8N8V2 638 aaPredicted RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 MORN4Q8NDC4 146 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 MDS2Q8NDY4 140 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 CATSPER1Q8NEC5 780 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.79□□□□□ -0.36
CD9-208ENST00000538834 TCP10LQ8TDR4 215 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 SELENOMQ8WWX9 145 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 UCN3Q969E3 161 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 TM4SF18Q96CE8 201 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 PGM2Q96G03 612 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 ZNF354BQ96LW1 612 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 ZIM3Q96PE6 472 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 MFRPQ9BY79 579 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 ACPTQ9BZG2 426 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 ELOVL6Q9H5J4 265 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 RPF2Q9H7B2 306 aaKnown RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 TEX10Q9NXF1 929 aaPredicted RBP12.79□□□□□ -0.36
CD9-208ENST00000538834 STMN3Q9NZ72 180 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 SENP1Q9P0U3 644 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 VPS29Q9UBQ0 182 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 MID2Q9UJV3 735 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 FBXW2Q9UKT8 454 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 NTNG1Q9Y2I2 539 aa12.79□□□□□ -0.36
CD9-208ENST00000538834 ZNF407Q9C0G0 2248 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 DOPEY2Q9Y3R5 2298 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 NCKAP5O14513 1909 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 PGRMC2O15173 223 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 ULK1O75385 1050 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 WISP1O95388 367 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 GPR75O95800 540 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 AIFM1O95831 613 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 FGF4P08620 206 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 PRPH2P23942 346 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 ALDH3A1P30838 453 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 ARRB2P32121 409 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 TRHRP34981 398 aaPredicted RBP12.78□□□□□ -0.36
CD9-208ENST00000538834 DEKP35659 375 aaKnown RBP12.78□□□□□ -0.36
CD9-208ENST00000538834 STT3AP46977 705 aa12.78□□□□□ -0.36
CD9-208ENST00000538834 MLF1P58340 268 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms