RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 MAPK11Q15759 364 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 ZIC1Q15915 447 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 OR4C11Q6IEV9 310 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 TNFAIP8L2Q6P589 184 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 ZNF793Q6ZN11 406 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 Q6ZPB1 254 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 LGI4Q8N135 537 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 OR52E1Q8NGJ3 308 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 EXOSC8Q96B26 276 aaKnown RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 MRPL38Q96DV4 380 aaKnown RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 SCARF2Q96GP6 870 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 PIP5K1AQ99755 562 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 NIPSNAP1Q9BPW8 284 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 RAB11FIP5Q9BXF6 653 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 FZD3Q9NPG1 666 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 ACSS1Q9NUB1 689 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 WARS2Q9UGM6 360 aaKnown RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 PCDHGA2Q9Y5H1 932 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 MRPS14O60783 128 aaKnown RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 RNGTTO60942 597 aaKnown RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 MT-ND2P03891 347 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 DDX5P17844 614 aaKnown RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 GGT2P36268 569 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 BCL6P41182 706 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 MAP2K4P45985 399 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 HYAL2Q12891 473 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 PUM1Q14671 1186 aaKnown RBP eCLIP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 MLC1Q15049 377 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 CTF1Q16619 201 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 UAP1L1Q3KQV9 507 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 RPS26P11Q5JNZ5 115 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 ATAT1Q5SQI0 421 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 C6orf120Q7Z4R8 191 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 ADCK2Q7Z695 626 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 FAM20CQ8IXL6 584 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 ZNF540Q8NDQ6 660 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 TTLQ8NG68 377 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 ZBED6CLQ96FA7 236 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-208ENST00000538333 APOOQ9BUR5 198 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 MVB12BQ9H7P6 319 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 SLC6A20Q9NP91 592 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 CCNB1IP1Q9NPC3 277 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 RNF6Q9Y252 685 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 POFUT2Q9Y2G5 429 aa13.31□□□□□ -0.28
LIMK1-208ENST00000538333 A0A0G2JN53 185 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 A0A1W2PQF6 199 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 C4orf51C9J302 202 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 FAM20BO75063 409 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 ADAM23O75077 832 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 BCAS1O75363 584 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 BCHEP06276 602 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 TFPTP0C1Z6 253 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 RHCEP18577 417 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 NTSR1P30989 418 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 ADPRMQ3LIE5 342 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 SYT6Q5T7P8 510 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 PRSS48Q7RTY5 328 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 ARHGAP22Q7Z5H3 698 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 OR9Q2Q8NGE9 314 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 GANCQ8TET4 914 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 DNASE1L2Q92874 299 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 TMEM19Q96HH6 336 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 C17orf62Q9BQA9 187 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 DPH7Q9BTV6 452 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 SERHL2Q9H4I8 314 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 KLHL31Q9H511 634 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 PLGRKTQ9HBL7 147 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 PRDM8Q9NQV8 689 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 HMGN4O00479 90 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 PCDH17O14917 1159 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 RGS10O43665 173 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 MAN1A2O60476 641 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 MFN2O95140 757 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 GABARAPO95166 117 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 BCL10O95999 233 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 VIPP01282 170 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 HOXB3P14651 431 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 PEBP1P30086 187 aaKnown RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 MAT2AP31153 395 aaKnown RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 KCNC4Q03721 635 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 SPCS2Q15005 226 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 TMEM35AQ53FP2 167 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 NDUFAF5Q5TEU4 345 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 GPR32P1Q8NGA4 272 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 IPCEF1Q8WWN9 437 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 RORBQ92753 470 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 S1PR5Q9H228 398 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 FGF22Q9HCT0 170 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 MRPS30Q9NP92 439 aaKnown RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 SCHIP1Q9P0W5 487 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-208ENST00000538333 GPSM3Q9Y4H4 160 aa13.3□□□□□ -0.28
LIMK1-208ENST00000538333 F5P12259 2224 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 PDZK1P1A8MUH7 402 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 DNTTP04053 509 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 IFNW1P05000 195 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 SERPIND1P05546 499 aa13.29□□□□□ -0.28
LIMK1-208ENST00000538333 DRD2P14416 443 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms