RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 COX14Q96I36 57 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 OR2A14Q96R47 310 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ATOH8Q96SQ7 321 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 NMUR2Q9GZQ4 415 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ING2Q9H160 280 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ABI3Q9P2A4 366 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 RPS6KB2Q9UBS0 482 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 PCTPQ9UKL6 214 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 CORO1CQ9ULV4 474 aaPredicted RBP6.85□□□□□ -1.31
MSH6-209ENST00000538136 DNAJC15Q9Y5T4 150 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ASPMQ8IZT6 3477 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 C2orf16Q68DN1 1984 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 GBF1Q92538 1859 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 A0A1W2PS29 197 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 H3BML4 177 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 H7C0S8 307 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 PDPK1O15530 556 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 SLC22A3O75751 556 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 KRT33AO76009 404 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 PLGP00747 810 aaPredicted RBP6.85□□□□□ -1.31
MSH6-209ENST00000538136 TPOP07202 933 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 NCK1P16333 377 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 CCND1P24385 295 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 CASRP41180 1078 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 MC3RP41968 323 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 PRKAA2P54646 552 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 OR4C11Q6IEV9 310 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 SLC2A7Q6PXP3 512 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 DEF8Q6ZN54 512 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 GALNT12Q8IXK2 581 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 PRR7Q8TB68 274 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 HCAR2Q8TDS4 363 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 NXPE2Q96DL1 559 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 SERPINI1Q99574 410 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 DUSP26Q9BV47 211 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 DEFB127Q9H1M4 99 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 SLC6A20Q9NP91 592 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 PRMT8Q9NR22 394 aaPredicted RBP6.85□□□□□ -1.31
MSH6-209ENST00000538136 ZNF180Q9UJW8 692 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ACTL7BQ9Y614 415 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 C15orf38-AP3S2A0A0A6YYH1 394 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 A1L4Q6 167 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 A8MVJ9 347 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 NPIPA5E9PKD4 350 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 TP73O15350 636 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 HCRTR2O43614 444 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 MPC1LP0DKB6 136 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 LAMP1P11279 417 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 CEACAM1P13688 526 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 IL7RP16871 459 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 IRX1P78414 480 aaPredicted RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 MSLNQ13421 630 aaPredicted RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 CYLC2Q14093 348 aaPredicted RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 EXOC3L2Q2M3D2 409 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 STEAP4Q687X5 459 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 ALG1LQ6GMV1 187 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 FBXO42Q6P3S6 717 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 LRRC70Q7Z2Q7 622 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 PEX13Q92968 403 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 C3orf30Q96M34 536 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 DPH2Q9BQC3 489 aaPredicted RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 SLC25A23Q9BV35 468 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 CDCP1Q9H5V8 836 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 HPF1Q9NWY4 346 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 NPIPA1Q9UND3 350 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 GTF2A1LQ9UNN4 478 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 ACANP16112 2415 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 SLC28A1O00337 649 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 ETHE1O95571 254 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 PIM1P11309 404 aaPredicted RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 COL6A2P12110 1019 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 GTF2E2P29084 291 aaKnown RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 PKLRP30613 574 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 HNRNPH1P31943 449 aaKnown RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 ARSFP54793 590 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 ENPP2Q13822 863 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 DEPDC1Q5TB30 811 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 C9orf135Q5VTT2 229 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 CYHR1Q6ZMK1 362 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 SLC38A9Q8NBW4 561 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 OR10A6Q8NH74 314 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 PIK3R3Q92569 461 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 MAL2Q969L2 176 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 CDRT15Q96T59 188 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 CSF3RQ99062 836 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 GRIP2Q9C0E4 1043 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 QRSL1Q9H0R6 528 aaKnown RBP6.84□□□□□ -1.31
MSH6-209ENST00000538136 C3orf14Q9HBI5 128 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 PLAC1Q9HBJ0 212 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 P4HTMQ9NXG6 502 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 TANC1Q9C0D5 1861 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 PRR14LQ5THK1 2151 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 SIP14410 1827 aa6.84□□□□□ -1.31
MSH6-209ENST00000538136 DIRAS1O95057 198 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 CKMT1AP12532 417 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 RPS3P23396 243 aaKnown RBP eCLIP6.84□□□□□ -1.325e-7■■■□□ 16.7
MSH6-209ENST00000538136 SLC7A1P30825 629 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 COPZ1P61923 177 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 RAET1LQ5VY80 246 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms