RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ZYG11AQ6WRX3 759 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CHSY3Q70JA7 882 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 MILR1Q7Z6M3 343 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 LCA5Q86VQ0 697 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 ZNF595Q8IYB9 648 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 C4orf33Q8N1A6 199 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 BEST3Q8N1M1 668 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 MDS2Q8NDY4 140 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 OR1N1Q8NGS0 311 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CAVIN3Q969G5 261 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 ZBTB9Q96C00 473 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 L3HYPDHQ96EM0 354 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 LPAR4Q99677 370 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 MRPL1Q9BYD6 325 aaKnown RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 ALOXE3Q9BYJ1 711 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CDCP1Q9H5V8 836 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CLMPQ9H6B4 373 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 LIN28AQ9H9Z2 209 aaKnown RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 KCNK13Q9HB14 408 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 SLAMF7Q9NQ25 335 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 TEX10Q9NXF1 929 aaPredicted RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 ANKRD10Q9NXR5 420 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 C19orf25Q9UFG5 118 aaPredicted RBP7.84□□□□□ -1.15
SPARC-208ENST00000538026 DCDC2Q9UHG0 476 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 LGALS13Q9UHV8 139 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 ADGRE2Q9UHX3 823 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 CES1P1Q9UKY3 287 aa7.84□□□□□ -1.15
SPARC-208ENST00000538026 FBN2P35556 2912 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 NOTCH2Q04721 2471 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 GLOD5A6NK44 160 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 CYSRT1A8MQ03 144 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 MANBAO00462 879 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 CDH16O75309 829 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 SUPT7LO94864 414 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 AIFM1O95831 613 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 KLK1P06870 262 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 KRT4P19013 534 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 ARRB2P32121 409 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 SSR2P43308 183 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 ARFIP1P53367 373 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 MLF1P58340 268 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 SKP1P63208 163 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 PMP22Q01453 160 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 DUSP2Q05923 314 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 SLC13A2Q13183 592 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 PRSS53Q2L4Q9 553 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 AP5B1Q2VPB7 878 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 ZNF750Q32MQ0 723 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 SPINK14Q6IE38 97 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 RPUSD3Q6P087 351 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 SCIMPQ6UWF3 145 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 TRABD2AQ86V40 505 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 GPR180Q86V85 440 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 RPS19BP1Q86WX3 136 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 METTL4Q8N3J2 472 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 MREGQ8N565 214 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 CDYL2Q8N8U2 506 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 BANPQ8N9N5 519 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 GALNT11Q8NCW6 608 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 SRFBP1Q8NEF9 429 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 B3GNT7Q8NFL0 401 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 MYRIPQ8NFW9 859 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 GRHL3Q8TE85 626 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 AGAP11Q8TF27 550 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 SREK1Q8WXA9 508 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 NCLNQ969V3 563 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 ATP6V1E2Q96A05 226 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 PPWD1Q96BP3 646 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 C11orf24Q96F05 449 aaPredicted RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 VPS50Q96JG6 964 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 CNDP1Q96KN2 507 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 MAGEB10Q96LZ2 347 aaPredicted RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 ZNF382Q96SR6 550 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 RNF32Q9H0A6 362 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 ILKAPQ9H0C8 392 aaPredicted RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 TRIM45Q9H8W5 580 aaPredicted RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 PNO1Q9NRX1 252 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 TRPS1Q9UHF7 1281 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 G3BP2Q9UN86 482 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 TIMM22Q9Y584 194 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 COPG1Q9Y678 874 aaKnown RBP7.83□□□□□ -1.16
SPARC-208ENST00000538026 NCKAP5O14513 1909 aa7.83□□□□□ -1.16
SPARC-208ENST00000538026 APCP25054 2843 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 TRBV11-1A0A0K0K1C0 115 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 TLDC2A0PJX2 215 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 OR5H15A6NDH6 313 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 KLHL41O60662 606 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 PRAMEF2O60811 474 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 GLRA3O75311 464 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 SEMA7AO75326 666 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 SEMA3DO95025 777 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 OTCP00480 354 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 IGKV3-11P04433 115 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 FAM58BPP0C7Q3 252 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 KRT15P19012 456 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 CPN2P22792 545 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 MST1P26927 711 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 SERPINB3P29508 390 aa7.82□□□□□ -1.16
SPARC-208ENST00000538026 TRHRP34981 398 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms