RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PRR23D2P0DMB1 279 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SELLP14151 372 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 FNTBP49356 437 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 VEGFCP49767 419 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 DEFA6Q01524 100 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 ADIGQ0VDE8 80 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 PKN3Q6P5Z2 889 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 RHOUQ7L0Q8 258 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SHFQ7M4L6 423 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 TMCO2Q7Z6W1 182 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 GPR149Q86SP6 731 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 UBE2FQ969M7 185 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 FBXO32Q969P5 355 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 RHBDF1Q96CC6 855 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 MRPL48Q96GC5 212 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 MAGEB5Q9BZ81 275 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 BRINP2Q9C0B6 783 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CLN6Q9NWW5 311 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 RCOR3Q9P2K3 495 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 FBXL2Q9UKC9 423 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 UTS2RQ9UKP6 389 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC6A5Q9Y345 797 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM82A0PJX8 343 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 ARGFXA6NJG6 315 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 IL6P05231 212 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 GALTP07902 379 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 IL1RNP18510 177 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 NFKB1P19838 968 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 GGT2P36268 569 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 HSPA7P48741 367 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC11A1P49279 550 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 WNT7BP56706 349 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 LCP2Q13094 533 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CHRNA6Q15825 494 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 RBBP7Q16576 425 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 PHYKPLQ8IUZ5 450 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM145Q8NBT3 493 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CAMKVQ8NCB2 501 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 APH1BQ8WW43 257 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CENPIQ92674 756 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 HGDQ93099 445 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC25A46Q96AG3 418 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 ISG20Q96AZ6 181 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 TBC1D20Q96BZ9 403 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 MRGPRX2Q96LB1 330 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 MYOCQ99972 504 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 DPAGT1Q9H3H5 408 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC52A3Q9NQ40 469 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 RPS6KA6Q9UK32 745 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CBY1Q9Y3M2 126 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC22A7Q9Y694 548 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 DNMT3AQ9Y6K1 912 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 DDX60LQ5H9U9 1706 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 LOXHD1Q8IVV2 1947 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 SFTPCP11686 197 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 GOT1P17174 413 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 XPAP23025 273 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 APEX1P27695 318 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 PBX3P40426 434 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CDC42P60953 191 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 MC2RQ01718 297 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 TRAM2Q15035 370 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 FAM187BQ17R55 369 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 RGS7BPQ6MZT1 257 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM107Q6UX40 140 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CYHR1Q6ZMK1 362 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 MCATQ8IVS2 390 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 DENND6BQ8NEG7 585 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 MOSPD2Q8NHP6 518 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 TMEM43Q9BTV4 400 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 DPH7Q9BTV6 452 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 BARHL1Q9BZE3 327 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 COMMD3Q9UBI1 195 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 PADI2Q9Y2J8 665 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CDH10Q9Y6N8 788 aa10.42□□□□□ -0.74
CLSTN3-207ENST00000537408 CDC7O00311 574 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 HLA-DQB1P01920 261 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC1A2P43004 574 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC10A6Q3KNW5 377 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 TPGS2Q68CL5 300 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC25A25Q6KCM7 469 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 MTSS1LQ765P7 747 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 SLC16A13Q7RTY0 426 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 CREB3L4Q8TEY5 395 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 KCNC2Q96PR1 638 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 PFDN5Q99471 154 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 H2AFJQ9BTM1 129 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 WDCPQ9H6R7 721 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 CHMP1AQ9HD42 196 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 C1orf109Q9NX04 203 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 ZNF624Q9P2J8 865 aaPredicted RBP10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 GSTK1Q9Y2Q3 226 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 SMCHD1A6NHR9 2005 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 QSOX1O00391 747 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 LGI1O95970 557 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 RAB5BP61020 215 aa10.41□□□□□ -0.74
CLSTN3-207ENST00000537408 SMAD2Q15796 467 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms