RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 DEPDC1Q5TB30 811 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 PRAMEF9Q5VWM5 478 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 KHDRBS2Q5VWX1 349 aaKnown RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 TTC19Q6DKK2 380 aaPredicted RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 TMEM211Q6ICI0 200 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 CYP20A1Q6UW02 462 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 ZDHHC24Q6UX98 284 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 C16orf47Q6ZP98 133 aaPredicted RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 TAOK1Q7L7X3 1001 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 VN1R5Q7Z5H4 357 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 SCUBE1Q8IWY4 988 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 MCEMP1Q8IX19 187 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 OR4N5Q8IXE1 308 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 GPALPP1Q8IXQ4 340 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 APCDD1LQ8NCL9 501 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 MNS1Q8NEH6 495 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 AGAP11Q8TF27 550 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 ZNF473Q8WTR7 871 aaKnown RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 MTFMTQ96DP5 389 aaKnown RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 WDR34Q96EX3 536 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 CSF3RQ99062 836 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 MTERF1Q99551 399 aaKnown RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 MS4A8Q9BY19 250 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 TSPYL1Q9H0U9 437 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 RPF2Q9H7B2 306 aaKnown RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 TRIM45Q9H8W5 580 aaPredicted RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 WDR41Q9HAD4 459 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 SNX15Q9NRS6 342 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 IGSF5Q9NSI5 407 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 MS4A12Q9NXJ0 267 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 COQ3Q9NZJ6 369 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 MYOTQ9UBF9 498 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 PHF11Q9UIL8 331 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 PPT2Q9UMR5 302 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 MEMO1Q9Y316 297 aa7.8□□□□□ -1.16
DDB1-208ENST00000537120 TNPO3Q9Y5L0 923 aaKnown RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 KLF2Q9Y5W3 355 aaPredicted RBP7.8□□□□□ -1.16
DDB1-208ENST00000537120 IQANK1A0A1B0GTG1 560 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 A0A1B0GTH9 108 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 POC1B-GALNT4F8VUJ3 575 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 TGFBR3LH3BV60 316 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 FANCGO15287 622 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 SMIM24O75264 130 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 KLHL2O95198 593 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 CLDN14O95500 239 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 P04436 131 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 CD22P20273 847 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 CNR1P21554 472 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 GRNP28799 593 aaKnown RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 PTGER1P34995 402 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 BUD31P41223 144 aaPredicted RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 SOX3P41225 446 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 PIK3CBP42338 1070 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 PIK3CGP48736 1102 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 GPR143P51810 404 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 ALDH18A1P54886 795 aaKnown RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 RPS13P62277 151 aaKnown RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 PPIAP62937 165 aaKnown RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 RNF4P78317 190 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 IRF9Q00978 393 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 GTF2H2Q13888 395 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 ACAP2Q15057 778 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 CPSF6Q16630 551 aaKnown RBP eCLIP7.79□□□□□ -1.16
DDB1-208ENST00000537120 WHAMMP3Q1A5X7 153 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 ZNF630Q2M218 657 aaPredicted RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 ZNF750Q32MQ0 723 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 RNFT1Q5M7Z0 435 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 TEX35Q5T0J7 233 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 LIPJQ5W064 366 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 GRHL2Q6ISB3 625 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 GTF2H2CQ6P1K8 395 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 OPN5Q6U736 354 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 C3P1Q6ZMU1 363 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 BNC2Q6ZN30 1099 aaPredicted RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 Q6ZPB1 254 aaPredicted RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 RTL4Q6ZR62 310 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 MDGA2Q7Z553 956 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 UBE3DQ7Z6J8 389 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 GPR180Q86V85 440 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 DOLPP1Q86YN1 238 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 LAS2Q8IYD9 372 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 RNF175Q8N4F7 328 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 PSD4Q8NDX1 1056 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 HUS1BQ8NHY5 278 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 RHEBL1Q8TAI7 183 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 CA5BP1Q8WTZ4 195 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 PTPMT1Q8WUK0 201 aaPredicted RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 TANKQ92844 425 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 PPWD1Q96BP3 646 aaKnown RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 SDCCAG3Q96C92 435 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 ART5Q96L15 291 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 C16orf45Q96MC5 204 aaPredicted RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 ATOH8Q96SQ7 321 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 SORBS1Q9BX66 1292 aaKnown RBP7.79□□□□□ -1.16
DDB1-208ENST00000537120 LDAHQ9H6V9 325 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 EXO5Q9H790 373 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 IPPKQ9H8X2 491 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.79□□□□□ -1.161e-9■■■■□ 23.5
DDB1-208ENST00000537120 AHSPQ9NZD4 102 aa7.79□□□□□ -1.16
DDB1-208ENST00000537120 ZNF835Q9Y2P0 537 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms