RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 B4GALNT4Q76KP1 1039 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 SETD3Q86TU7 594 aaPredicted RBP5.98□□□□□ -1.45
CCDC60-203ENST00000536742 CBWD2Q8IUF1 395 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 TMEM217Q8N7C4 229 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 ANKRD52Q8NB46 1076 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 FAM57AQ8TBR7 257 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 RAB40AQ8WXH6 277 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 IRGQQ8WZA9 623 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 ZNF501Q96CX3 271 aaPredicted RBP5.98□□□□□ -1.45
CCDC60-203ENST00000536742 ZBED6CLQ96FA7 236 aaPredicted RBP5.98□□□□□ -1.45
CCDC60-203ENST00000536742 PPM1MQ96MI6 270 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 PRMT1Q99873 361 aaKnown RBP5.98□□□□□ -1.45
CCDC60-203ENST00000536742 STRA6Q9BX79 667 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 FANCEQ9HB96 536 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 ZNF304Q9HCX3 659 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 SEMA4BQ9NPR2 832 aaPredicted RBP5.98□□□□□ -1.45
CCDC60-203ENST00000536742 GPATCH2LQ9NWQ4 482 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 HCN3Q9P1Z3 774 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 ICKQ9UPZ9 632 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 SLC17A4Q9Y2C5 497 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 CRYL1Q9Y2S2 319 aa5.98□□□□□ -1.45
CCDC60-203ENST00000536742 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 XPO1O14980 1071 aaKnown RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 TTI1O43156 1089 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 TCF21O43680 179 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 RECQL5O94762 991 aaPredicted RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 EML2O95834 649 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 RHOCP08134 193 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 F3P13726 295 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 MMP11P24347 488 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 DAOAP59103 153 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 PMP22Q01453 160 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 CUL4AQ13619 759 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 CAPRIN1Q14444 709 aaKnown RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 SQLEQ14534 574 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 PSMD6Q15008 389 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 RPE65Q16518 533 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 ME3Q16798 604 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 AP5B1Q2VPB7 878 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 FBXL22Q6P050 247 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 TMEM26Q6ZUK4 368 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 CAMK1DQ8IU85 385 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 DIS3L2Q8IYB7 885 aaKnown RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 RFLNBQ8N5W9 214 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 MAPK1IP1LQ8NDC0 245 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 SETD9Q8NE22 299 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 OR2AP1Q8NGE2 309 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 HCAR2Q8TDS4 363 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 CNOT9Q92600 299 aaKnown RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 HTRA1Q92743 480 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 ZNF396Q96N95 335 aaPredicted RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 CCL19Q99731 98 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 TRIM51Q9BSJ1 452 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 FUZQ9BT04 418 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 REG4Q9BYZ8 158 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 TM6SF2Q9BZW4 377 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 TRIM7Q9C029 511 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 ESRP2Q9H6T0 727 aaKnown RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 MRPL44Q9H9J2 332 aaKnown RBP5.97□□□□□ -1.45
CCDC60-203ENST00000536742 TAS2R14Q9NYV8 317 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 CHMP5Q9NZZ3 219 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 HEY2Q9UBP5 337 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
CCDC60-203ENST00000536742 PHF3Q92576 2039 aaKnown RBP5.96□□□□□ -1.45
CCDC60-203ENST00000536742 MPDZO75970 2070 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 LOC100653049A0A140TA62 436 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 TUBAL3A6NHL2 446 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 KRT34O76011 436 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 MTA2O94776 668 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 GSRP00390 522 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 SERPINC1P01008 464 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 STATHP02808 62 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 SLC2A3P11169 496 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 AP3M2P53677 418 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 ALCAMQ13740 583 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 KLF9Q13886 244 aaPredicted RBP5.96□□□□□ -1.46
CCDC60-203ENST00000536742 SLC18A3Q16572 532 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 UGP2Q16851 508 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 TDRD12Q587J7 1177 aaKnown RBP5.96□□□□□ -1.46
CCDC60-203ENST00000536742 ENTPD8Q5MY95 495 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 SH2D4BQ5SQS7 431 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 C6orf52Q5T4I8 152 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 ADGRG6Q86SQ4 1221 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 CHERPQ8IWX8 916 aaKnown RBP5.96□□□□□ -1.46
CCDC60-203ENST00000536742 NECAB1Q8N987 351 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 OR10Q1Q8NGQ4 319 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 OR6K2Q8NGY2 324 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 CCDC110Q8TBZ0 833 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 DQX1Q8TE96 717 aaKnown RBP5.96□□□□□ -1.46
CCDC60-203ENST00000536742 ZFAND2BQ8WV99 257 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 TMEM170AQ8WVE7 144 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 HSPH1Q92598 858 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 EME1Q96AY2 570 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 SYTL2Q9HCH5 934 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 TBC1D29Q9UFV1 150 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 NOCTQ9UK39 431 aaKnown RBP5.96□□□□□ -1.46
CCDC60-203ENST00000536742 SRPRBQ9Y5M8 271 aaKnown RBP5.96□□□□□ -1.46
CCDC60-203ENST00000536742 CCDC88CQ9P219 2028 aa5.96□□□□□ -1.46
CCDC60-203ENST00000536742 ALOX12BO75342 701 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms