RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 SLC6A15Q9H2J7 730 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 ZNF703Q9H7S9 590 aaPredicted RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 LZTFL1Q9NQ48 299 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 TRMT1Q9NXH9 659 aaKnown RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 SLC17A6Q9P2U8 582 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 ATG4BQ9Y4P1 393 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 TLN2Q9Y4G6 2542 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 COL6A5A8TX70 2615 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 LRIT2A6NDA9 550 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 NPEPPSL1A6NEC2 478 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 ANKDD1BA6NHY2 528 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 EEF1E1-BLOC1S5C9J1V9 151 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 EEF1E1O43324 174 aaKnown RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 DYRK3O43781 588 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 ZNF354AO60765 605 aaPredicted RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 CTNSO60931 367 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 LDB3O75112 727 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 IL2RAP01589 272 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 AHSGP02765 367 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 CCDC175P0C221 793 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 C1GALT1C1LP0DN25 315 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 EPXP11678 715 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 GDF1P27539 372 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 GABRB3P28472 473 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 GDF5P43026 501 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 MSH2P43246 934 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 MTTPP55157 894 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 LIM2P55344 173 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 DCAF7P61962 342 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 NKX6-1P78426 367 aaPredicted RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 ID2Q02363 134 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 TGM3Q08188 693 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 EFTUD2Q15029 972 aaKnown RBP eCLIP7.41□□□□□ -1.22
CHFR-211ENST00000535897 DAZAP2Q15038 168 aaPredicted RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 POU4F3Q15319 338 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 ACSF3Q4G176 576 aaPredicted RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 FAM45BPQ6NSW5 357 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 TTC27Q6P3X3 843 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 SBSNQ6UWP8 590 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 MAATS1Q7Z4T9 603 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 KRT78Q8N1N4 520 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 VWA5B2Q8N398 1253 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 SPC24Q8NBT2 197 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 NAXEQ8NCW5 288 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 OR8K3Q8NH51 312 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 NEIL3Q8TAT5 605 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 LINC01560Q8TB33 94 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 SLC22A8Q8TCC7 542 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 FAM45AQ8TCE6 357 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 MAGOHBQ96A72 148 aaKnown RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 KIAA1191Q96A73 305 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 HSPBAP1Q96EW2 488 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 SIGLEC10Q96LC7 697 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 GAL3ST4Q96RP7 486 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 ZFP64Q9NPA5 681 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 VTI1BQ9UEU0 232 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 FOXD3Q9UJU5 478 aaPredicted RBP7.41□□□□□ -1.22
CHFR-211ENST00000535897 IKZF3Q9UKT9 509 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 DAPP1Q9UN19 280 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 CLDN16Q9Y5I7 305 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 SPACA6W5XKT8 324 aa7.41□□□□□ -1.22
CHFR-211ENST00000535897 NCKAP5O14513 1909 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 MPDZO75970 2070 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 FN1P02751 2386 aaKnown RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 STAB1Q9NY15 2570 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 NCF1BA6NI72 391 aaPredicted RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 CLCA1A8K7I4 914 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 NCF1CA8MVU1 366 aaPredicted RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 FAM171A2A8MVW0 826 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 CDC7O00311 574 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 CYR61O00622 381 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 CLGNO14967 610 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 BANF1O75531 89 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 CLEC3AO75596 197 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 TRAPPC6AO75865 159 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 LRATO95237 230 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 TTC4O95801 387 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 HEXAP06865 529 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 RFPL3SP0C7P2 107 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 NCF1P14598 390 aaPredicted RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 GSTM2P28161 218 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 PCSK6P29122 969 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 HOXC12P31275 282 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 MAGEA3P43357 314 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 HNMTP50135 292 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 AGFG1P52594 562 aaKnown RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 TBL3Q12788 808 aaKnown RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 DUSP8Q13202 625 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 SERTAD2Q14140 314 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 TOMM20Q15388 145 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 PPP1R3AQ16821 1122 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 SPANXN3Q5MJ09 141 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 CCDC137Q6PK04 289 aaKnown RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 SLCO4C1Q6ZQN7 724 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 SEM1Q6ZVN7 128 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 LACC1Q8IV20 430 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 P3H2Q8IVL5 708 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 PPIL6Q8IXY8 311 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 SPACA9Q96E40 222 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms