RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RNF175Q8N4F7 328 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 ZNF655Q8N720 491 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 CSNK1A1LQ8N752 337 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 FAM47BQ8NA70 645 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 RCBTB1Q8NDN9 531 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 OR8K5Q8NH50 307 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 TBC1D15Q8TC07 691 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 LRTOMTQ8WZ04 291 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SLC35B4Q969S0 331 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 ZNF501Q96CX3 271 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 LIN37Q96GY3 246 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 C3orf30Q96M34 536 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 DEPDC7Q96QD5 511 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 HBEGFQ99075 208 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 ACPTQ9BZG2 426 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 FGF21Q9NSA1 209 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 RIC8BQ9NVN3 520 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 GID8Q9NWU2 228 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 VPS29Q9UBQ0 182 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 MDC1Q14676 2089 aaKnown RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 P2RX6O15547 441 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 NDUFS4O43181 175 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 ETHE1O95571 254 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 TGFB1P01137 390 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 PRR35P0CG20 571 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SMIM10L1P0DMW3 83 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 STT3AP46977 705 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 TMBIM6P55061 237 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 BNIP2Q12982 314 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SMU1Q2TAY7 513 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 DEFB110Q30KQ9 67 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 MTX3Q5HYI7 312 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 HES3Q5TGS1 186 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 PAOXQ6QHF9 649 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 LARP4Q71RC2 724 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 TMPRSS12Q86WS5 348 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 ARHGEF39Q8N4T4 335 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 BMPERQ8N8U9 685 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 OR2T11Q8NH01 316 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 ADAMTS14Q8WXS8 1223 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SLCO4A1Q96BD0 722 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SMIM10Q96HG1 83 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 NPLQ9BXD5 320 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 NLNQ9BYT8 704 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 OR51B5Q9H339 312 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 RPF2Q9H7B2 306 aaKnown RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 CXorf21Q9HAI6 301 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 FANCEQ9HB96 536 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 CCM2LQ9NUG4 571 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SIRT5Q9NXA8 310 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 AKAP7Q9P0M2 348 aaPredicted RBP11.67□□□□□ -0.54
SCARB1-204ENST00000535005 TMEM181Q9P2C4 612 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SERTAD3Q9UJW9 196 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 CLCA2Q9UQC9 943 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 SNX13Q9Y5W8 968 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 PTGDR2Q9Y5Y4 395 aa11.67□□□□□ -0.54
SCARB1-204ENST00000535005 URADA6NGE7 173 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 B4E171 279 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 H3BMQ9 156 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 CSO75390 466 aaKnown RBP11.66□□□□□ -0.54
SCARB1-204ENST00000535005 JUNBP17275 347 aaPredicted RBP11.66□□□□□ -0.54
SCARB1-204ENST00000535005 TSPAN7P41732 249 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 GCGRP47871 477 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 STXBP1P61764 594 aaKnown RBP11.66□□□□□ -0.54
SCARB1-204ENST00000535005 HMGCS1Q01581 520 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 MC2RQ01718 297 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 EIF3IQ13347 325 aaKnown RBP11.66□□□□□ -0.54
SCARB1-204ENST00000535005 GPR19Q15760 415 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 IMPG1Q17R60 797 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 GARNL3Q5VVW2 1013 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 TMEM214Q6NUQ4 689 aaKnown RBP11.66□□□□□ -0.54
SCARB1-204ENST00000535005 DHFR2Q86XF0 187 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 SRFBP1Q8NEF9 429 aaKnown RBP11.66□□□□□ -0.54
SCARB1-204ENST00000535005 OR1L3Q8NH93 324 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 MS4A6EQ96DS6 147 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 C11orf24Q96F05 449 aaPredicted RBP11.66□□□□□ -0.54
SCARB1-204ENST00000535005 PPP3R2Q96LZ3 170 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 COG8Q96MW5 612 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 F2RL3Q96RI0 385 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 AICDAQ9GZX7 198 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 FBXO8Q9NRD0 319 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 OCIAD1Q9NX40 245 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 CROTQ9UKG9 612 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 PACSIN3Q9UKS6 424 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 SLC22A7Q9Y694 548 aa11.66□□□□□ -0.54
SCARB1-204ENST00000535005 TMEM150CB9EJG8 249 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 BOLA2-SMG1P6H3BVE0 249 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 FBP2O00757 339 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 LSM1O15116 133 aaKnown RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 SULT1C4O75897 302 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 SERPIND1P05546 499 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 CTSBP07858 339 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 SNRPB2P08579 225 aaKnown RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 FGF5P12034 268 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 TSFMP43897 325 aaKnown RBP11.65□□□□□ -0.54
SCARB1-204ENST00000535005 ITGA1P56199 1179 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 IL11RAQ14626 422 aa11.65□□□□□ -0.54
SCARB1-204ENST00000535005 GRM7Q14831 915 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms