RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	CRYM	Q14894	314 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	PPP4R4	Q6NUP7	873 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	RGS9BP	Q6ZS82	235 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	BTLA	Q7Z6A9	289 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	CD163	Q86VB7	1156 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	GPALPP1	Q8IXQ4	340 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	RIBC1	Q8N443	379 aa	Predicted RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	CREB3L4	Q8TEY5	395 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	SLC5A11	Q8WWX8	675 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	RND1	Q92730	232 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	NAT9	Q9BTE0	207 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	NPL	Q9BXD5	320 aa	Predicted RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	SPNS1	Q9H2V7	528 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	NECTIN3	Q9NQS3	549 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	KCNN3	Q9UGI6	736 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	RNF6	Q9Y252	685 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	YARS2	Q9Y2Z4	477 aa	Known RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	MED13L	Q71F56	2210 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	EXOC1L	A0A1B0GW35	172 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	PABPN1L	A6NDY0	278 aa	Known RBP	10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	PSMD12	O00232	456 aa	Predicted RBP	10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	HS6ST1	O60243	411 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	ITGA10	O75578	1167 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	B3GALT4	O96024	378 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	SERPIND1	P05546	499 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	HOXD4	P09016	255 aa	Predicted RBP	10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	MSX1	P28360	303 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	ELK3	P41970	407 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	SLCO1A2	P46721	670 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	FASTKD3	Q14CZ7	662 aa	Known RBP	10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	EMC4	Q5J8M3	183 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	SPANXN3	Q5MJ09	141 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	RBM20	Q5T481	1227 aa	Known RBP	10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	PAOX	Q6QHF9	649 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	ACAD11	Q709F0	780 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	TAOK1	Q7L7X3	1001 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	MDGA2	Q7Z553	956 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	SCUBE1	Q8IWY4	988 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	CYP4Z2P	Q8N1L4	340 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	CA13	Q8N1Q1	262 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	TMEM156	Q8N614	296 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	GATAD2B	Q8WXI9	593 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	PGM2	Q96G03	612 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	VMP1	Q96GC9	406 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	AIF1L	Q9BQI0	150 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	KCNJ16	Q9NPI9	418 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	TIMMDC1	Q9NPL8	285 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	ZNF223	Q9UK11	482 aa	Predicted RBP	10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	CHMP2B	Q9UQN3	213 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	VWA7	Q9Y334	891 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	CLDN16	Q9Y5I7	305 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	KCNE2	Q9Y6J6	123 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	SPG11	Q96JI7	2443 aa		10.74	□□□□□ -0.69
CTNND1-238	ENST00000534647	TRBV11-1	A0A0K0K1C0	115 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	FAM221A	A4D161	298 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	OR14I1	A6ND48	311 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647		B2RBV5	119 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	CLDN4	O14493	209 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	CDH16	O75309	829 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	BANF1	O75531	89 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	GSTM2	P28161	218 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	STX2	P32856	288 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	SSR4	P51571	173 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	RAB8A	P61006	207 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	MAGOH	P61326	146 aa	Known RBP	10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	CDKL1	Q00532	357 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	PPP1R3A	Q16821	1122 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	UBAP2	Q5T6F2	1119 aa	Known RBP	10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	SBSN	Q6UWP8	590 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	C3orf62	Q6ZUJ4	267 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	THOC6	Q86W42	341 aa	Known RBP	10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	OR52N2	Q8NGI0	321 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	CFAP36	Q96G28	342 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	AICDA	Q9GZX7	198 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	KLHL31	Q9H511	634 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	ZDHHC11	Q9H8X9	412 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	LIN7B	Q9HAP6	207 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	TEX264	Q9Y6I9	313 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647	IKBKG	Q9Y6K9	419 aa		10.73	□□□□□ -0.69
CTNND1-238	ENST00000534647		A0A1B0GVC2	190 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	TMEM200C	A6NKL6	621 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	C4orf51	C9J302	202 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	POC1B-GALNT4	F8VUJ3	575 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	ZFAND5	O76080	213 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	MYO1D	O94832	1006 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	IGHG3	P01860	377 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	HPD	P32754	393 aa	Predicted RBP	10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	MSH2	P43246	934 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	STXBP1	P61764	594 aa	Known RBP	10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	GXYLT1	Q4G148	440 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	TEDDM1	Q5T9Z0	273 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	HECTD2	Q5U5R9	776 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	CES4A	Q5XG92	561 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	ZNF595	Q8IYB9	648 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	KLHDC8A	Q8IYD2	350 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	PSD4	Q8NDX1	1056 aa		10.72	□□□□□ -0.69
CTNND1-238	ENST00000534647	TTL	Q8NG68	377 aa		10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms