RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	NFKBIZ	Q9BYH8	718 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	THAP2	Q9H0W7	228 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	DPEP3	Q9H4B8	488 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	EBF2	Q9HAK2	575 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	CRLF2	Q9HC73	371 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	GKN1	Q9NS71	199 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	HOMER3	Q9NSC5	361 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	MIS18A	Q9NYP9	233 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	PCSK1N	Q9UHG2	260 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	TMED3	Q9Y3Q3	217 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	RREB1	Q92766	1687 aa		4.26	□□□□□ -1.73
ATM-223	ENST00000533979	C1orf167	Q5SNV9	1468 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	PCNT	O95613	3336 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	PPL	O60437	1756 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	LRRIQ4	A6NIV6	560 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	SLC22A2	O15244	555 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	SCO2	O43819	266 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	GPR137B	O60478	399 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	SNX3	O60493	162 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	NDUFS7	O75251	213 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	KIAA0754	O94854	1291 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	MFN2	O95140	757 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	LIPF	P07098	398 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	CHRNG	P07510	517 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	SP1	P08047	785 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	ASNS	P08243	561 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	HMBS	P08397	361 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	ZCCHC18	P0CG32	403 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	TNNI3	P19429	210 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	SLC3A1	Q07837	685 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	MSLN	Q13421	630 aa	Predicted RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	KRT31	Q15323	416 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	RBBP7	Q16576	425 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	CTF1	Q16619	201 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	ELFN2	Q5R3F8	820 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	NCR3LG1	Q68D85	454 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	CTR9	Q6PD62	1173 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	LRRC70	Q7Z2Q7	622 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	XRN1	Q8IZH2	1706 aa	Known RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	TDH	Q8IZJ6	230 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	CCDC63	Q8NA47	563 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	TANK	Q92844	425 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	DAZL	Q92904	295 aa	Known RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	AZIN2	Q96A70	460 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	RFT1	Q96AA3	541 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	THOC1	Q96FV9	657 aa	Known RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	PIWIL1	Q96J94	861 aa	Known RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	MAGED4	Q96JG8	741 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	C3orf30	Q96M34	536 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	NODAL	Q96S42	347 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	EPYC	Q99645	322 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	CMKLR1	Q99788	373 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	VCX2	Q9H322	139 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	PCDH9	Q9HC56	1237 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	YAE1D1	Q9NRH1	226 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	MIOS	Q9NXC5	875 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	PKD2L2	Q9NZM6	624 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	KLHL9	Q9P2J3	617 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	COPS7A	Q9UBW8	275 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	LOXL2	Q9Y4K0	774 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	SPIN1	Q9Y657	262 aa	Predicted RBP	4.25	□□□□□ -1.73
ATM-223	ENST00000533979	KIAA1217	Q5T5P2	1943 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	CASZ1	Q86V15	1759 aa		4.25	□□□□□ -1.73
ATM-223	ENST00000533979	NRXN1	Q9ULB1	1477 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	ABCC4	O15439	1325 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	CGNL1	Q0VF96	1302 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	IFT172	Q9UG01	1749 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	GOLGA6L9	A6NEM1	432 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979		E9PBE3	544 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	NPIPA3	F8WFD2	350 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979		H0Y8G0	127 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979		H3BMM5	538 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	NME2P1	O60361	137 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	ACSL4	O60488	711 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	GMNN	O75496	209 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	WISP2	O76076	250 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	KDM4B	O94953	1096 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	UMOD	P07911	640 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	AMD1	P17707	334 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	CYP3A5	P20815	502 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	ATP6V1C1	P21283	382 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	ANOS1	P23352	680 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	DGKA	P23743	735 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	SSTR1	P30872	391 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	STIP1	P31948	543 aa	Known RBP	4.24	□□□□□ -1.73
ATM-223	ENST00000533979	ADRA1A	P35348	466 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	TNFSF10	P50591	281 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	VCP	P55072	806 aa	Known RBP	4.24	□□□□□ -1.73
ATM-223	ENST00000533979	SEC61B	P60468	96 aa	Known RBP	4.24	□□□□□ -1.73
ATM-223	ENST00000533979	FKBP1B	P68106	108 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	MBTD1	Q05BQ5	628 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	CACNG1	Q06432	222 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	DMTN	Q08495	405 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	RASGEF1B	Q0VAM2	473 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	FUT7	Q11130	342 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	NONO	Q15233	471 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
ATM-223	ENST00000533979	PPP1R7	Q15435	360 aa		4.24	□□□□□ -1.73
ATM-223	ENST00000533979	ANKRD55	Q3KP44	614 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms