RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ALDH9A1P49189 494 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 FCHO2Q0JRZ9 810 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 CDK10Q15131 360 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 ATAD3CQ5T2N8 411 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 PAQR6Q6TCH4 344 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 OLIG3Q7RTU3 272 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 GIMAP1Q8WWP7 306 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 PLAGL1Q9UM63 463 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 NPIPB8E9PQR5 432 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 PTPN5P54829 565 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 SSX1Q16384 188 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 SPIN4Q56A73 249 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 SLCO4C1Q6ZQN7 724 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 NRARPQ7Z6K4 114 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 RBM45Q8IUH3 476 aaKnown RBP18.44■□□□□ 0.54
CAPN1-226ENST00000533820 CPA6Q8N4T0 437 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 DENND6BQ8NEG7 585 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 TMEM203Q969S6 136 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 OTUB1Q96FW1 271 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-226ENST00000533820 IL17FQ96PD4 163 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 C1GALT1Q9NS00 363 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 PEX16Q9Y5Y5 336 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 A0A0X1KG70 313 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 RNASET2O00584 256 aaKnown RBP18.44■□□□□ 0.54
CAPN1-226ENST00000533820 PSIP1O75475 530 aaKnown RBP18.44■□□□□ 0.54
CAPN1-226ENST00000533820 LATS1O95835 1130 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 APOA1P02647 267 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 INHAP05111 366 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 SNTA1Q13424 505 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 OR52N2Q8NGI0 321 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 SLC46A2Q9BY10 475 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 LINC00597Q9H2U6 94 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 ANKHQ9HCJ1 492 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 FBXL12Q9NXK8 326 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 HS3ST2Q9Y278 367 aa18.44■□□□□ 0.54
CAPN1-226ENST00000533820 HELZP42694 1942 aaKnown RBP18.44■□□□□ 0.54
CAPN1-226ENST00000533820 PDZK1P1A8MUH7 402 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF197O14709 1029 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 IL3P08700 152 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ICAM2P13598 275 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 TNFSF8P32971 234 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 GRIN2CQ14957 1233 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ZFP69Q49AA0 526 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 SLX4IPQ5VYV7 408 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 MEX3DQ86XN8 651 aaKnown RBP18.43■□□□□ 0.54
CAPN1-226ENST00000533820 SDHCQ99643 169 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ABCG4Q9H172 646 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 TIGARQ9NQ88 270 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 CTPS2Q9NRF8 586 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 HCFC1R1Q9NWW0 138 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 CLN6Q9NWW5 311 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 A0A1W2PRB8 838 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 E9PQ18 207 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 UGDHO60701 494 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 PTTG1O95997 202 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 RPS19P39019 145 aaKnown RBP18.43■□□□□ 0.54
CAPN1-226ENST00000533820 SLC15A1P46059 708 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 DEFA1P59665 94 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 DEFA3P59666 94 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 PRKCDQ05655 676 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 TMEM115Q12893 351 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF284Q2VY69 593 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 TRIM40Q6P9F5 258 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 DEF8Q6ZN54 512 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 HTR3DQ70Z44 454 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 GPR65Q8IYL9 337 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 IQCF1Q8N6M8 205 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 C16orf78Q8WTQ4 265 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ASPNQ9BXN1 380 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 MIEF1Q9NQG6 463 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 PRKAB1Q9Y478 270 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 THSD7BQ9C0I4 1608 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ANKDD1BA6NHY2 528 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 CENPXA8MT69 81 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 A8MUA0 341 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 RFXAPO00287 272 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 BCHEP06276 602 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 M6PRP20645 277 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 PTGER1P34995 402 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 OR2B6P58173 313 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 POLR2LP62875 67 aaKnown RBP18.43■□□□□ 0.54
CAPN1-226ENST00000533820 FBXO43Q4G163 708 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 FRMPD2BQ6IN97 320 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 IDO2Q6ZQW0 420 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 TRAPPC5Q8IUR0 188 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 GPR151Q8TDV0 419 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 GEMIN6Q8WXD5 167 aaKnown RBP18.43■□□□□ 0.54
CAPN1-226ENST00000533820 PIK3R3Q92569 461 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 FOPNLQ96NB1 174 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 ATP13A2Q9NQ11 1180 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 MUTYHQ9UIF7 546 aa18.43■□□□□ 0.54
CAPN1-226ENST00000533820 A0A0G2JMP0 313 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 LRRTM2O43300 516 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 ATG13O75143 517 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 FURINP09958 794 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 XCR1P46094 333 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 CRISP1P54107 249 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 LIM2P55344 173 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 FAM109AQ8N4B1 249 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 AP2M1Q96CW1 435 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms