RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 A0A0A6YYD5 115 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 IGHV5-51A0A0C4DH38 117 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 C1orf226A1L170 272 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 NVLO15381 856 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 TBX19O60806 448 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 CSO75390 466 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 MSL3P1P0C860 447 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ATP5A1P25705 553 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 IL12AP29459 219 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 VSX2P58304 361 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 RELBQ01201 579 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 SLAMF1Q13291 335 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 GRM7Q14831 915 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 TLR1Q15399 786 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 C1orf146Q5VVC0 180 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 FAM71E1Q6IPT2 247 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 B3GNT8Q7Z7M8 397 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 MCATQ8IVS2 390 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 GPR135Q8IZ08 494 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ACOT4Q8N9L9 421 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 TTC29Q8NA56 475 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 AGBL5Q8NDL9 886 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 RCBTB1Q8NDN9 531 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZFP28Q8NHY6 868 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 KLHL6Q8WZ60 621 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 STMN2Q93045 179 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 COQ8BQ96D53 544 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 EGLN2Q96KS0 407 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 PPM1MQ96MI6 270 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 CDRT15Q96T59 188 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 NPLQ9BXD5 320 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZNF717Q9BY31 904 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 KLHL25Q9H0H3 589 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZNF768Q9H5H4 540 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ANKHQ9HCJ1 492 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 BTNL2Q9UIR0 455 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 MKL2Q9ULH7 1088 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 MAN2B2Q9Y2E5 1009 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 SPTBN4Q9H254 2564 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 BLACEA4D250 179 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 EVPLLA8MZ36 301 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 C9JVG2 144 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 RTCAO00442 366 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 GMNNO75496 209 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 TBX6O95947 436 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 GBAP04062 536 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 IL3P08700 152 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZNF888P0CJ79 500 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 NELFEP18615 380 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ME2P23368 584 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 COL8A1P27658 744 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 NTSP30990 170 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZFP36L2P47974 494 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 LSSP48449 732 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 SEPHS1P49903 392 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 DGKQP52824 942 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 PDX1P52945 283 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 BTN3A2P78410 334 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 HYAL2Q12891 473 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 EIF3IQ13347 325 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 PDE7AQ13946 482 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 UGT8Q16880 541 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 MUM1Q2TAK8 710 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 FAM214AQ32MH5 1076 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 NDUFAF5Q5TEU4 345 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 YOD1Q5VVQ6 348 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 TMEM214Q6NUQ4 689 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 SLC2A7Q6PXP3 512 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 NET1Q7Z628 596 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 C7orf57Q8NEG2 295 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 UTP15Q8TED0 518 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 JADE3Q92613 823 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 GTF2H4Q92759 462 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 POP5Q969H6 163 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZNF837Q96EG3 531 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZBED6CLQ96FA7 236 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 SLC41A2Q96JW4 573 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 TRIM15Q9C019 465 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 MUC13Q9H3R2 512 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 IL1RL2Q9HB29 575 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 LYRM4Q9HD34 91 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 SLC52A3Q9NQ40 469 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 PRDM7Q9NQW5 492 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ZNF282Q9UDV7 671 aaPredicted RBP10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 ENTPD4Q9Y227 616 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 PCDHGA7Q9Y5G6 932 aa10.35□□□□□ -0.75
CCDC90B-218ENST00000533761 GABRR3A8MPY1 467 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 OIP5O43482 229 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 NR2F6P10588 404 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 PPP2R1BP30154 601 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 ALDH9A1P49189 494 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 RAB8AP61006 207 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 ACY1Q03154 408 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 BNIP2Q12982 314 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 TARDBPQ13148 414 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 FAM53BQ14153 422 aa10.34□□□□□ -0.75
CCDC90B-218ENST00000533761 DEFB134Q4QY38 66 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms