RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 LANCL2Q9NS86 450 aa12.17□□□□□ -0.46
TRAPPC4-212ENST00000533058 VPS29Q9UBQ0 182 aa12.17□□□□□ -0.46
TRAPPC4-212ENST00000533058 ZDHHC2Q9UIJ5 367 aa12.17□□□□□ -0.46
TRAPPC4-212ENST00000533058 RAP2CQ9Y3L5 183 aa12.17□□□□□ -0.46
TRAPPC4-212ENST00000533058 PLPP1O14494 284 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 CHST10O43529 356 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 SKAP2O75563 359 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 ETHE1O95571 254 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 TBX6O95947 436 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 FHP07954 510 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 LINC00032P0C843 101 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 RNH1P13489 461 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 JAK1P23458 1154 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 ARRB2P32121 409 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 HMGCS1Q01581 520 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 RHAGQ02094 409 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 ZNF33BQ06732 778 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 INPP5JQ15735 1006 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 MINDY4Q4G0A6 757 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 CES4AQ5XG92 561 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 KANK2Q63ZY3 851 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 CYP20A1Q6UW02 462 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 PAGE2Q7Z2X7 111 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 CPEB2Q7Z5Q1 589 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 UBE3DQ7Z6J8 389 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 HOMEZQ8IX15 550 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 KIRREL3Q8IZU9 778 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 ZNF781Q8N8C0 355 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 TWIST2Q8WVJ9 160 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 PEX11GQ96HA9 241 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 ACPTQ9BZG2 426 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 ZBTB20Q9HC78 741 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 PFDN4Q9NQP4 134 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 THAP1Q9NVV9 213 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 PSD3Q9NYI0 1048 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 PPT2Q9UMR5 302 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 SPACA6W5XKT8 324 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 NUP210LQ5VU65 1888 aa12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 TNRC6AQ8NDV7 1962 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-212ENST00000533058 CLEC18AA5D8T8 446 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 SLC28A1O00337 649 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 RGS14O43566 566 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 SEMA3DO95025 777 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 GBAP04062 536 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 FGF4P08620 206 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 KITP10721 976 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 HIST1H1TP22492 207 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 ATP5A1P25705 553 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 RPL14P50914 215 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 EEF1A2Q05639 463 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 ACSM2AQ08AH3 577 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 SLAMF1Q13291 335 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 NR6A1Q15406 480 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 PDCD2Q16342 344 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 COLEC12Q5KU26 742 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 B3GNTL1Q67FW5 361 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 ACSM2BQ68CK6 577 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 PLAG1Q6DJT9 500 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 FAAH2Q6GMR7 532 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 CLEC18BQ6UXF7 455 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 ANKRD37Q7Z713 158 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 NUDT13Q86X67 352 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 C1orf52Q8N6N3 182 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 ACOT4Q8N9L9 421 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 CLEC18CQ8NCF0 446 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 FAM76AQ8TAV0 307 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 HAS2Q92819 552 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 QRFPRQ96P65 431 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 SORT1Q99523 831 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 BARD1Q99728 777 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 NPLQ9BXD5 320 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 PRDM7Q9NQW5 492 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 FBXW2Q9UKT8 454 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 DNAJC15Q9Y5T4 150 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 PTGDR2Q9Y5Y4 395 aa12.15□□□□□ -0.46
TRAPPC4-212ENST00000533058 DOCK10Q96BY6 2186 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 CDK2AP1O14519 115 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 PIP5K1BO14986 540 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 B4GALT2O60909 372 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 DNAJB6O75190 326 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 VPS4BO75351 444 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 SEC22BO75396 215 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 EEDO75530 441 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 CDC123O75794 336 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 MYO1DO94832 1006 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 KLK1P06870 262 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 TSFMP43897 325 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 RUNX2Q13950 521 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 TLR1Q15399 786 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 NSDHLQ15738 373 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 EXT1Q16394 746 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 CCNYL2Q5T2Q4 361 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 H3F3CQ6NXT2 135 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 RPUSD3Q6P087 351 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 ZNF793Q6ZN11 406 aa12.14□□□□□ -0.47
TRAPPC4-212ENST00000533058 QSOX2Q6ZRP7 698 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms