RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 EMBQ6PCB8 327 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 CYP20A1Q6UW02 462 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 RPS19BP1Q86WX3 136 aaKnown RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 NUDT13Q86X67 352 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 TMEM132CQ8N3T6 1108 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 APCDD1LQ8NCL9 501 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 ANKRD9Q96BM1 317 aaPredicted RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 VMP1Q96GC9 406 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 ZNF382Q96SR6 550 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 DEFB126Q9BYW3 111 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 RPF2Q9H7B2 306 aaKnown RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 AGPAT4Q9NRZ5 378 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 FARSBQ9NSD9 589 aaKnown RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 LYARQ9NX58 379 aaKnown RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 VTI1BQ9UEU0 232 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 SNX6Q9UNH7 406 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 PPIEQ9UNP9 301 aaKnown RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 ATG4BQ9Y4P1 393 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 ASB4Q9Y574 426 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 HIVEP3Q5T1R4 2406 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 USP9XQ93008 2570 aaPredicted RBP14.34□□□□□ -0.11
CPSF1-210ENST00000532935 CROCCQ5TZA2 2017 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 TRBV11-1A0A0K0K1C0 115 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 TLDC2A0PJX2 215 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 GABRR3A8MPY1 467 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 G3V2L1 256 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 PROM1O43490 865 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 TMPRSS11DO60235 418 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 FGF17O60258 216 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 PRAMEF2O60811 474 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 MLYCDO95822 493 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 PDYNP01213 254 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 PROCP04070 461 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 FAM58BPP0C7Q3 252 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 MYL2P10916 166 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 KRT4P19013 534 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 TLX1P31314 330 aaPredicted RBP14.34□□□□□ -0.11
CPSF1-210ENST00000532935 BUD31P41223 144 aaPredicted RBP14.34□□□□□ -0.11
CPSF1-210ENST00000532935 ST13P50502 369 aaKnown RBP14.34□□□□□ -0.11
CPSF1-210ENST00000532935 CLCN2P51788 898 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 GPR143P51810 404 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 ID2Q02363 134 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 TUBA3CQ13748 450 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 NR6A1Q15406 480 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 CCDC153Q494R4 210 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 C18orf63Q68DL7 685 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 TUBA3EQ6PEY2 450 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 ZYG11AQ6WRX3 759 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 GPRIN3Q6ZVF9 776 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 RIBC1Q8N443 379 aaPredicted RBP14.34□□□□□ -0.11
CPSF1-210ENST00000532935 CDYL2Q8N8U2 506 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 C7orf57Q8NEG2 295 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 GRHL3Q8TE85 626 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 SELENOMQ8WWX9 145 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 TANKQ92844 425 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 DAZLQ92904 295 aaKnown RBP14.34□□□□□ -0.11
CPSF1-210ENST00000532935 CAVIN3Q969G5 261 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 NCLNQ969V3 563 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 CCDC126Q96EE4 140 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 UTP23Q9BRU9 249 aaKnown RBP14.34□□□□□ -0.11
CPSF1-210ENST00000532935 AHSPQ9NZD4 102 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 GRID1Q9ULK0 1009 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 CLCA3PQ9Y6N3 262 aa14.34□□□□□ -0.11
CPSF1-210ENST00000532935 DOPEY2Q9Y3R5 2298 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 A0A1W2PR48 441 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 COPEO14579 308 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 PLIN3O60664 434 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 PRKRAO75569 313 aaKnown RBP14.33□□□□□ -0.12
CPSF1-210ENST00000532935 GBAP04062 536 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-210ENST00000532935 CD96P40200 585 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 MLF1P58340 268 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 IGLV3-21P80748 117 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-210ENST00000532935 SLC18A2Q05940 514 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 LCP2Q13094 533 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 MRPL49Q13405 166 aaKnown RBP14.33□□□□□ -0.12
CPSF1-210ENST00000532935 INAQ16352 499 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 FAM219BQ5XKK7 198 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 FAM180AQ6UWF9 173 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 OR4N5Q8IXE1 308 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 ARMC10Q8N2F6 343 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 OR14A16Q8NHC5 309 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 PTPMT1Q8WUK0 201 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-210ENST00000532935 SIGLEC12Q96PQ1 595 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 MRPL1Q9BYD6 325 aaKnown RBP14.33□□□□□ -0.12
CPSF1-210ENST00000532935 GSTO2Q9H4Y5 243 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 BRF2Q9HAW0 419 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 ANKRD10Q9NXR5 420 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 ZNF223Q9UK11 482 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-210ENST00000532935 ADAM29Q9UKF5 820 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 SLC12A4Q9UP95 1085 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 STK38LQ9Y2H1 464 aa14.33□□□□□ -0.12
CPSF1-210ENST00000532935 FLNBO75369 2602 aaKnown RBP14.32□□□□□ -0.12
CPSF1-210ENST00000532935 SETXQ7Z333 2677 aaKnown RBP14.32□□□□□ -0.12
CPSF1-210ENST00000532935 CLEC18AA5D8T8 446 aa14.32□□□□□ -0.12
CPSF1-210ENST00000532935 C17orf105B2RV13 164 aa14.32□□□□□ -0.12
CPSF1-210ENST00000532935 MANBAO00462 879 aa14.32□□□□□ -0.12
CPSF1-210ENST00000532935 CDK2AP1O14519 115 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms