RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 FGF17O60258 216 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 MAN1A2O60476 641 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 NPHS1O60500 1241 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 KLHL41O60662 606 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 ERLIN1O75477 346 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SORBS2O94875 1100 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 KLK1P06870 262 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 CHRNGP07510 517 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 FGF4P08620 206 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 HMOX2P30519 316 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 CASRP41180 1078 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 RAE1P78406 368 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 CSTF3Q12996 717 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SLC13A2Q13183 592 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 MFAP5Q13361 173 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 RCN2Q14257 317 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 TERF2Q15554 542 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 EXT1Q16394 746 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 CRB2Q5IJ48 1285 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SLC6A19Q695T7 634 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SCIMPQ6UWF3 145 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 ISLR2Q6UXK2 745 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 COMMD6Q7Z4G1 85 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 TRIM46Q7Z4K8 759 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 CLNKQ7Z7G1 428 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 ARMC10Q8N2F6 343 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 KIF2BQ8N4N8 673 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 GBP7Q8N8V2 638 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 TEX19Q8NA77 164 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 PTPMT1Q8WUK0 201 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 TM4SF18Q96CE8 201 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 ALOXE3Q9BYJ1 711 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SHCBP1LQ9BZQ2 653 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 RPF2Q9H7B2 306 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SIRT5Q9NXA8 310 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 TEX10Q9NXF1 929 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 AHSPQ9NZD4 102 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 PTGFRNQ9P2B2 879 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 PHF11Q9UIL8 331 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 MRPS33Q9Y291 106 aaKnown RBP13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 SHANK1Q9Y566 2161 aa13.03□□□□□ -0.32
TSPAN4-220ENST00000532375 DPM1O60762 260 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 AIFM1O95831 613 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 ALPPP05187 535 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 SERPINB4P48594 390 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 HMGCS1Q01581 520 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 ID2Q02363 134 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 CASP8Q14790 479 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 ARL13AQ5H913 290 aaPredicted RBP13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 CFAP157Q5JU67 520 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 DGAT2L6Q6ZPD8 337 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 ZCCHC23Q6ZST2 131 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 C1orf52Q8N6N3 182 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 DNAJB14Q8TBM8 379 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 TANKQ92844 425 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 TLCD1Q96CP7 247 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 APIPQ96GX9 242 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 TRMOQ9BU70 441 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 EPN3Q9H201 632 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 TUBB1Q9H4B7 451 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 TMBIM4Q9HC24 238 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 ADAP2Q9NPF8 381 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 CES1P1Q9UKY3 287 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 G3BP2Q9UN86 482 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 NBASA2RRP1 2371 aa13.02□□□□□ -0.33
TSPAN4-220ENST00000532375 A0A1W2PS29 197 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 NPIPB8E9PQR5 432 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 MYO1DO94832 1006 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 GPR75O95800 540 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 DDAH2O95865 285 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 UROSP10746 265 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 PLA2G2AP14555 144 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 FOLH1Q04609 750 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 SERTAD2Q14140 314 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 KIAA0040Q15053 153 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 ELAVL1Q15717 326 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 CCNYL2Q5T2Q4 361 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 CLEC6AQ6EIG7 209 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 GALNT18Q6P9A2 607 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 CYP20A1Q6UW02 462 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 RNF165Q6ZSG1 346 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 Q6ZSR9 355 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 ZNF605Q86T29 641 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 CUZD1Q86UP6 607 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 CRLF3Q8IUI8 442 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 MMP21Q8N119 569 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 CATSPER1Q8NEC5 780 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 B3GNT7Q8NFL0 401 aa13.01□□□□□ -0.33
TSPAN4-220ENST00000532375 HAS2Q92819 552 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms