RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 LGALS12Q96DT0 336 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 ERLEC1Q96DZ1 483 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 CERS2Q96G23 380 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 ATF6BQ99941 703 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 NUP58Q9BVL2 599 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 OR10A2Q9H208 303 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 ESRP2Q9H6T0 727 aaKnown RBP2.95□□□□□ -1.94
CDC27-207ENST00000531206 C10orf88Q9H8K7 445 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 ZNF160Q9HCG1 818 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 DPP3Q9NY33 737 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 NXF1Q9UBU9 619 aaKnown RBP2.95□□□□□ -1.94
CDC27-207ENST00000531206 ADAM21Q9UKJ8 722 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 PRDM4Q9UKN5 801 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 OR1A2Q9Y585 309 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 SLC30A1Q9Y6M5 507 aa2.95□□□□□ -1.94
CDC27-207ENST00000531206 CDH23Q9H251 3354 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 LCTP09848 1927 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 GOLGA8QA0A0J9YX86 632 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 TMEM202A6NGA9 273 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 AHRRA9YTQ3 701 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 PSMD9O00233 223 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 PRRG1O14668 218 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 CHUKO15111 745 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 POLR3GO15318 223 aaPredicted RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 ENTPD5O75356 428 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 GNA14O95837 355 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 TROVE2P10155 538 aaKnown RBP eCLIP2.94□□□□□ -1.94
CDC27-207ENST00000531206 TGM2P21980 687 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 SFPQP23246 707 aaKnown RBP eCLIP2.94□□□□□ -1.94
CDC27-207ENST00000531206 HOXA6P31267 233 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 MNDAP41218 407 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 NPY2RP49146 381 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 POU3F4P49335 361 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 CDH11P55287 796 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 ROR2Q01974 943 aaKnown RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 DYRK1AQ13627 763 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 EFNB3Q15768 340 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 C6orf136Q5SQH8 315 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 CLVS2Q5SYC1 327 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 CCNYL2Q5T2Q4 361 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 FAM102AQ5T9C2 384 aaPredicted RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 RAET1LQ5VY80 246 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 TRMT1LQ7Z2T5 733 aaKnown RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 LIMS2Q7Z4I7 341 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 CD163Q86VB7 1156 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 LRRC34Q8IZ02 419 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 TTC29Q8NA56 475 aaPredicted RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 OR4F17Q8NGA8 305 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 OR4F5Q8NH21 305 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 RSC1A1Q92681 617 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 FKBP10Q96AY3 582 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 OR4F4Q96R69 305 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 SLC22A12Q96S37 553 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 NUDT9Q9BW91 350 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 UBQLN3Q9H347 655 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 ATP13A3Q9H7F0 1226 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 KLHL13Q9P2N7 655 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 TRMT112Q9UI30 125 aaKnown RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 A3GALT2U3KPV4 340 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 KIAA1549LQ6ZVL6 1849 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 OTOGLQ3ZCN5 2332 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 LOC100506127A0A0U1RQW1 187 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 GAGE10A6NGK3 116 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 TTC34A8MYJ7 566 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 F8WDY8 70 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 BCKDKO14874 412 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 ARPC3O15145 178 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 FLRT2O43155 660 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 LDB3O75112 727 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 CSO75390 466 aaKnown RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 GPC4O75487 556 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 VAMP5O95183 116 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 POP4O95707 220 aaKnown RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 BAG3O95817 575 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 KRT14P02533 472 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 MT-ND1P03886 318 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 GPTP24298 496 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 BMI1P35226 326 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 CEACAM3P40198 252 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 BDKRB1P46663 353 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 ARRB1P49407 418 aaPredicted RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 NDST1P52848 882 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 YWHAZP63104 245 aaKnown RBP2.94□□□□□ -1.94
CDC27-207ENST00000531206 CXADRP78310 365 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 MXRA7P84157 204 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 TIAL1Q01085 375 aaKnown RBP eCLIP2.94□□□□□ -1.942e-6■■■■□ 22
CDC27-207ENST00000531206 KDSRQ06136 332 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 FOXL1Q12952 345 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 GPNMBQ14956 572 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 SF3B4Q15427 424 aaKnown RBP eCLIP2.94□□□□□ -1.943e-7■■■■□ 21.2
CDC27-207ENST00000531206 Q3ZCU0 254 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 SLC25A53Q5H9E4 307 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 ZMAT1Q5H9K5 638 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 LY6G6FQ5SQ64 297 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 ATAD3BQ5T9A4 648 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 MFSD12Q6NUT3 480 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 ALLCQ8N6M5 410 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 FAM133AQ8N9E0 248 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 OR1B1Q8NGR6 318 aa2.94□□□□□ -1.94
CDC27-207ENST00000531206 LRRC15Q8TF66 581 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms