RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 OC90Q02509 493 aaPredicted RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 RBPJQ06330 500 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 STX4Q12846 297 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 ZRSR2Q15696 482 aaKnown RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 PTGR2Q8N8N7 351 aaPredicted RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 EIF1ADQ8N9N8 165 aaKnown RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 MYRIPQ8NFW9 859 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 TANKQ92844 425 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 MTERF1Q99551 399 aaKnown RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 TXLNGYQ9BZA5 131 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 MRPL46Q9H2W6 279 aaKnown RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 ZBTB26Q9HCK0 441 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 LYARQ9NX58 379 aaKnown RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 CPSF2Q9P2I0 782 aaKnown RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 MYOTQ9UBF9 498 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 XPR1Q9UBH6 696 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 PCTPQ9UKL6 214 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 KLF13Q9Y2Y9 288 aaPredicted RBP11.22□□□□□ -0.61
COPB1-206ENST00000529210 CLCA3PQ9Y6N3 262 aa11.22□□□□□ -0.61
COPB1-206ENST00000529210 CROCCQ5TZA2 2017 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 A0A0A6YYD5 115 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 TRIM49D1C9J1S8 452 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 OR7A17O14581 309 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 PROM1O43490 865 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 FGF17O60258 216 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 PRKNO60260 465 aaPredicted RBP11.21□□□□□ -0.61
COPB1-206ENST00000529210 IGKV3-11P04433 115 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 SBK3P0C264 359 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 CPN2P22792 545 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 GALNSP34059 522 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 BSGP35613 385 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 STT3AP46977 705 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 SSR4P51571 173 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 RAP1GDS1P52306 607 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 RPS13P62277 151 aaKnown RBP11.21□□□□□ -0.61
COPB1-206ENST00000529210 TNFRSF17Q02223 184 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 ALDH6A1Q02252 535 aaKnown RBP11.21□□□□□ -0.61
COPB1-206ENST00000529210 TRAF3Q13114 568 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 SLAMF1Q13291 335 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 CPSF6Q16630 551 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPB1-206ENST00000529210 LGSNQ5TDP6 509 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 MTFR2Q6P444 385 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 HSDL2Q6YN16 418 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 CLNKQ7Z7G1 428 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 GPR180Q86V85 440 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 IFT20Q8IY31 132 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 RNF175Q8N4F7 328 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 OR52B6Q8NGF0 335 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 C16orf52Q8NHV5 167 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 PHF21BQ96EK2 531 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 RPF2Q9H7B2 306 aaKnown RBP11.21□□□□□ -0.61
COPB1-206ENST00000529210 NOL11Q9H8H0 719 aaKnown RBP11.21□□□□□ -0.61
COPB1-206ENST00000529210 KLHL1Q9NR64 748 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 ADAM29Q9UKF5 820 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 FBXW2Q9UKT8 454 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 NFU1Q9UMS0 254 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 RNF11Q9Y3C5 154 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 ASB4Q9Y574 426 aa11.21□□□□□ -0.61
COPB1-206ENST00000529210 CRYBG3Q68DQ2 2970 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 MYO7BQ6PIF6 2116 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 EXOC1LA0A1B0GW35 172 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 POC1B-GALNT4F8VUJ3 575 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 KLRC4-KLRK1H3BQV0 150 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 RIPK2O43353 540 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 ASNA1O43681 348 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 LDB3O75112 727 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 SMIM24O75264 130 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 WISP2O76076 250 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 ETHE1O95571 254 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 IFNA16P05015 189 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 TLX1P31314 330 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 BUD31P41223 144 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 CCNG1P51959 295 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 HK2P52789 917 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 HNRNPH2P55795 449 aaKnown RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 DDX39BQ13838 428 aaKnown RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 MAPKAPK3Q16644 382 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 MPEG1Q2M385 716 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 SPRED3Q2MJR0 410 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 FRG2Q64ET8 278 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 MYLK4Q86YV6 388 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 CHERPQ8IWX8 916 aaKnown RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 ST13P4Q8IZP2 240 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 CYP4Z2PQ8N1L4 340 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 TMEM156Q8N614 296 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 ZFP62Q8NB50 900 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 OR5L2Q8NGL0 311 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 NUBPLQ8TB37 319 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 SLC2A12Q8TD20 617 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 ACMSDQ8TDX5 336 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 ZNF721Q8TF20 911 aa11.2□□□□□ -0.62
COPB1-206ENST00000529210 ZNF483Q8TF39 744 aaPredicted RBP11.2□□□□□ -0.62
COPB1-206ENST00000529210 FRG2BQ96QU4 278 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms