RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ADAM20O43506 726 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SYNCRIPO60506 623 aaKnown RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PDE9AO76083 593 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ATP5BP06576 529 aaKnown RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 F7P08709 466 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PAEPP09466 180 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 VDRP11473 427 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 POLR2CP19387 275 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 DGKAP23743 735 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ADORA2BP29275 332 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 AHRP35869 848 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PPP1R2P41236 205 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 GCLMP48507 274 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 RPL34P49207 117 aaKnown RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 TPMTP51580 245 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ARSEP51690 589 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 NDUFA8P51970 172 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 DLX5P56178 289 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SNX16P57768 344 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 YWHAGP61981 247 aaKnown RBP eCLIP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 IFI35P80217 286 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PLIN5Q00G26 463 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 LRRC63Q05C16 580 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 BST2Q10589 180 aaKnown RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 MEP1AQ16819 746 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 GARNL3Q5VVW2 1013 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SPOPLQ6IQ16 392 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 LCLAT1Q6UWP7 414 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SCARA5Q6ZMJ2 495 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 TPGS1Q6ZTW0 290 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 C9orf139Q6ZV77 190 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ENOSF1Q7L5Y1 443 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF329Q86UD4 541 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PIGZQ86VD9 579 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 UNC45BQ8IWX7 931 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 TRIML1Q8N9V2 468 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 DEFB124Q8NES8 71 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 OR2T3Q8NH03 318 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SECTM1Q8WVN6 248 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 IRGQQ8WZA9 623 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PRCCQ92733 491 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SEMA4DQ92854 862 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 JAKMIP2Q96AA8 810 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PHF21AQ96BD5 680 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 TMA16Q96EY4 203 aaKnown RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SIPA1Q96FS4 1042 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 HSFY1Q96LI6 401 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PAFAH2Q99487 392 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 DDOQ99489 341 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 RTN4RQ9BZR6 473 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ABCC13Q9NSE7 274 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 RMND1Q9NWS8 449 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ARHGEF38Q9NXL2 777 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 SUN2Q9UH99 717 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PLA2G4CQ9UP65 541 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 ZNF148Q9UQR1 794 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PTRH2Q9Y3E5 179 aaKnown RBP4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PCDH15Q96QU1 1955 aa4.41□□□□□ -1.7
CSDE1-212ENST00000529046 PCNX2A6NKB5 2137 aa4.4□□□□□ -1.7
CSDE1-212ENST00000529046 THADAQ6YHU6 1953 aa4.4□□□□□ -1.7
CSDE1-212ENST00000529046 SDK1Q7Z5N4 2213 aa4.4□□□□□ -1.7
CSDE1-212ENST00000529046 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 MAGEB17A8MXT2 336 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 WASH3PC4AMC7 463 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 TMEM178BH3BS89 294 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 GRID2O43424 1007 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 BUB3O43684 328 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 AVILO75366 819 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 IGLV3-27P01718 113 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 IGHV4-39P01824 125 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 TRIM49P0CI25 452 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 TRIM49CP0CI26 452 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 EPB41P11171 864 aaKnown RBP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 HLA-FP30511 346 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 NNMTP40261 264 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 MATKP42679 507 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 TKTL1P51854 596 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 PLK1P53350 603 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 GCNT1Q02742 428 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 EIF4EBP2Q13542 120 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 TOMM20Q15388 145 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 ZNF658Q5TYW1 1059 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 BSPRYQ5W0U4 402 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 TMEM215Q68D42 235 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 DHRS7BQ6IAN0 325 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 PLXDC2Q6UX71 529 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 LINGO4Q6UY18 593 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 RAD9BQ6WBX8 426 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 KRT74Q7RTS7 529 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 NFE4Q86UQ8 179 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 NAXDQ8IW45 347 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 C1orf52Q8N6N3 182 aaKnown RBP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 RBM15BQ8NDT2 890 aaKnown RBP4.4□□□□□ -1.71
CSDE1-212ENST00000529046 FIBINQ8TAL6 211 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 RNF139Q8WU17 664 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 SMPDL3BQ92485 455 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 SLC35C1Q96A29 364 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 FAM131CQ96AQ9 280 aa4.4□□□□□ -1.71
CSDE1-212ENST00000529046 DDX50Q9BQ39 737 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms